Gene : Glyma.06G268800 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2688
Name:  ? Glyma.06G268800 Secondary Identifier:  ? PAC:30552702
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G268800 0.5kb upstream 0.5kb upstream 38750 true Chr06: 45753991-45792740 Glycine max
Glyma.06G268800 0.5kb upstream 0.5kb upstream 500 false Chr06: 45792241-45792740 Glycine max
Glyma.06G268800 0.5kb downstream 0.5kb downstream 38750 true Chr06: 45753491-45792240 Glycine max
Glyma.06G268800 0.5kb downstream 0.5kb downstream 500 false Chr06: 45753491-45753990 Glycine max
Glyma.06G268800 1.0kb upstream 1.0kb upstream 39250 true Chr06: 45753991-45793240 Glycine max
Glyma.06G268800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 45792241-45793240 Glycine max
Glyma.06G268800 1.0kb downstream 1.0kb downstream 39250 true Chr06: 45752991-45792240 Glycine max
Glyma.06G268800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 45752991-45753990 Glycine max
Glyma.06G268800 2.0kb upstream 2.0kb upstream 40250 true Chr06: 45753991-45794240 Glycine max
Glyma.06G268800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 45792241-45794240 Glycine max
Glyma.06G268800 2.0kb downstream 2.0kb downstream 40250 true Chr06: 45751991-45792240 Glycine max
Glyma.06G268800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 45751991-45753990 Glycine max
Glyma.06G268800 5.0kb upstream 5.0kb upstream 43250 true Chr06: 45753991-45797240 Glycine max
Glyma.06G268800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 45792241-45797240 Glycine max
Glyma.06G268800 5.0kb downstream 5.0kb downstream 43250 true Chr06: 45748991-45792240 Glycine max
Glyma.06G268800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 45748991-45753990 Glycine max
Glyma.06G268800 10.0kb upstream 10.0kb upstream 48250 true Chr06: 45753991-45802240 Glycine max
Glyma.06G268800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 45792241-45802240 Glycine max
Glyma.06G268800 10.0kb downstream 10.0kb downstream 48250 true Chr06: 45743991-45792240 Glycine max
Glyma.06G268800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 45743991-45753990 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298104 5265 Fabidae View MSA
124071393 5270 Rosid View MSA
123738469 5271 Pentapetalae View MSA
122788721 5272 Eudicot View MSA
122045808 5273 Angiosperm View MSA
121347981 5274 Embryophyte View MSA
123380700 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.27027 0.0 7.54409    
cufflinks 3.87473 0.0 11.9645   High
cufflinks 1.33577 0.0 4.96346   Low
cufflinks 1.60135 0.0 5.61863    
cufflinks 2.74902 0.0 8.82858    
cufflinks 1.47558 0.0 5.53668    
cufflinks 2.22207 0.0 7.63765    
cufflinks 1.31526 0.0 4.96048   Low
cufflinks 2.68983 0.0 8.5926    
cufflinks 0.081     Low  
cufflinks 0.03     Low Low
cufflinks 0.128        
cufflinks 0.23       High
cufflinks 0.293       High
cufflinks 0.059        
cufflinks 0.155        
cufflinks 0.043     Low Low
cufflinks 0.163        
cufflinks 0.274       High
cufflinks 0.119        
cufflinks 0.043     Low Low
cufflinks 0.135        
cufflinks 0.233       High
cufflinks 0.036     Low Low
cufflinks 0.157        
cufflinks 0.058     Low  

0 Strain