Gene : Glyma.06G269400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13048 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 Genomic Order:  2694
Name:  ? Glyma.06G269400 Secondary Identifier:  ? PAC:30554068
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G269400 0.5kb upstream 0.5kb upstream 5017 true Chr06: 45821105-45826121 Glycine max
Glyma.06G269400 0.5kb upstream 0.5kb upstream 500 false Chr06: 45825622-45826121 Glycine max
Glyma.06G269400 0.5kb downstream 0.5kb downstream 5017 true Chr06: 45820605-45825621 Glycine max
Glyma.06G269400 0.5kb downstream 0.5kb downstream 500 false Chr06: 45820605-45821104 Glycine max
Glyma.06G269400 1.0kb upstream 1.0kb upstream 5517 true Chr06: 45821105-45826621 Glycine max
Glyma.06G269400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 45825622-45826621 Glycine max
Glyma.06G269400 1.0kb downstream 1.0kb downstream 5517 true Chr06: 45820105-45825621 Glycine max
Glyma.06G269400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 45820105-45821104 Glycine max
Glyma.06G269400 2.0kb upstream 2.0kb upstream 6517 true Chr06: 45821105-45827621 Glycine max
Glyma.06G269400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 45825622-45827621 Glycine max
Glyma.06G269400 2.0kb downstream 2.0kb downstream 6517 true Chr06: 45819105-45825621 Glycine max
Glyma.06G269400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 45819105-45821104 Glycine max
Glyma.06G269400 5.0kb upstream 5.0kb upstream 9517 true Chr06: 45821105-45830621 Glycine max
Glyma.06G269400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 45825622-45830621 Glycine max
Glyma.06G269400 5.0kb downstream 5.0kb downstream 9517 true Chr06: 45816105-45825621 Glycine max
Glyma.06G269400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 45816105-45821104 Glycine max
Glyma.06G269400 10.0kb upstream 10.0kb upstream 14517 true Chr06: 45821105-45835621 Glycine max
Glyma.06G269400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 45825622-45835621 Glycine max
Glyma.06G269400 10.0kb downstream 10.0kb downstream 14517 true Chr06: 45811105-45825621 Glycine max
Glyma.06G269400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 45811105-45821104 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305865 5265 Fabidae View MSA
124061574 5270 Rosid View MSA
123738457 5271 Pentapetalae View MSA
122793674 5272 Eudicot View MSA
122046284 5273 Angiosperm View MSA
121345634 5274 Embryophyte View MSA
123425946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.2545 0.0 78.1156 High  
cufflinks 38.1695 0.0 101.979 High  
cufflinks 22.5201 0.0 60.452 High Low
cufflinks 29.5329 0.0 78.8359 High  
cufflinks 47.6006 0.0 127.809 High  
cufflinks 69.3273 0.0 190.576 High High
cufflinks 56.4197 0.0 152.474 High  
cufflinks 50.5745 0.0 136.199 High  
cufflinks 37.783 0.0 100.91 High  
cufflinks 9.156     High  
cufflinks 3.411       Low
cufflinks 5.466        
cufflinks 11.196     High High
cufflinks 15.039     High High
cufflinks 2.338       Low
cufflinks 7.472     High  
cufflinks 5.625        
cufflinks 8.522     High  
cufflinks 8.074     High  
cufflinks 6.846        
cufflinks 5.506        
cufflinks 6.731        
cufflinks 6.931        
cufflinks 5.402        
cufflinks 7.522     High  
cufflinks 4.655        

0 Strain