Gene : PhHAL.6G018700 P. hallii HAL v2.1

Defline:  (1 of 1) K02723 - photosystem II PsbY protein (psbY) Genomic Order:  176
Name:  ? PhHAL.6G018700 Secondary Identifier:  ? PAC:40391886

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.6G018700 0.5kb upstream 0.5kb upstream 1737 true Chr06: 1397504-1399240 Panicum hallii HAL
PhHAL.6G018700 0.5kb upstream 0.5kb upstream 500 false Chr06: 1398741-1399240 Panicum hallii HAL
PhHAL.6G018700 0.5kb downstream 0.5kb downstream 1737 true Chr06: 1397004-1398740 Panicum hallii HAL
PhHAL.6G018700 0.5kb downstream 0.5kb downstream 500 false Chr06: 1397004-1397503 Panicum hallii HAL
PhHAL.6G018700 1.0kb upstream 1.0kb upstream 2237 true Chr06: 1397504-1399740 Panicum hallii HAL
PhHAL.6G018700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1398741-1399740 Panicum hallii HAL
PhHAL.6G018700 1.0kb downstream 1.0kb downstream 2237 true Chr06: 1396504-1398740 Panicum hallii HAL
PhHAL.6G018700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1396504-1397503 Panicum hallii HAL
PhHAL.6G018700 2.0kb upstream 2.0kb upstream 3237 true Chr06: 1397504-1400740 Panicum hallii HAL
PhHAL.6G018700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1398741-1400740 Panicum hallii HAL
PhHAL.6G018700 2.0kb downstream 2.0kb downstream 3237 true Chr06: 1395504-1398740 Panicum hallii HAL
PhHAL.6G018700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1395504-1397503 Panicum hallii HAL
PhHAL.6G018700 5.0kb upstream 5.0kb upstream 6237 true Chr06: 1397504-1403740 Panicum hallii HAL
PhHAL.6G018700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1398741-1403740 Panicum hallii HAL
PhHAL.6G018700 5.0kb downstream 5.0kb downstream 6237 true Chr06: 1392504-1398740 Panicum hallii HAL
PhHAL.6G018700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1392504-1397503 Panicum hallii HAL
PhHAL.6G018700 10.0kb upstream 10.0kb upstream 11237 true Chr06: 1397504-1408740 Panicum hallii HAL
PhHAL.6G018700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1398741-1408740 Panicum hallii HAL
PhHAL.6G018700 10.0kb downstream 10.0kb downstream 11237 true Chr06: 1387504-1398740 Panicum hallii HAL
PhHAL.6G018700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1387504-1397503 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175036 5267 Panicoideae View MSA
124579440 5269 Grass View MSA
122044260 5273 Angiosperm View MSA
121349394 5274 Embryophyte View MSA
123426328 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier