Gene : Glyma.06G275500 G. max Wm82.a2.v1
Defline:  (1 of 15) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  2755
Name:  ? Glyma.06G275500 Secondary Identifier:  ? PAC:30552157
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G275500 0.5kb upstream 0.5kb upstream 1825 true Chr06: 46642915-46644739 Glycine max
Glyma.06G275500 0.5kb upstream 0.5kb upstream 500 false Chr06: 46644240-46644739 Glycine max
Glyma.06G275500 0.5kb downstream 0.5kb downstream 1825 true Chr06: 46642415-46644239 Glycine max
Glyma.06G275500 0.5kb downstream 0.5kb downstream 500 false Chr06: 46642415-46642914 Glycine max
Glyma.06G275500 1.0kb upstream 1.0kb upstream 2325 true Chr06: 46642915-46645239 Glycine max
Glyma.06G275500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46644240-46645239 Glycine max
Glyma.06G275500 1.0kb downstream 1.0kb downstream 2325 true Chr06: 46641915-46644239 Glycine max
Glyma.06G275500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46641915-46642914 Glycine max
Glyma.06G275500 2.0kb upstream 2.0kb upstream 3325 true Chr06: 46642915-46646239 Glycine max
Glyma.06G275500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46644240-46646239 Glycine max
Glyma.06G275500 2.0kb downstream 2.0kb downstream 3325 true Chr06: 46640915-46644239 Glycine max
Glyma.06G275500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46640915-46642914 Glycine max
Glyma.06G275500 5.0kb upstream 5.0kb upstream 6325 true Chr06: 46642915-46649239 Glycine max
Glyma.06G275500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46644240-46649239 Glycine max
Glyma.06G275500 5.0kb downstream 5.0kb downstream 6325 true Chr06: 46637915-46644239 Glycine max
Glyma.06G275500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46637915-46642914 Glycine max
Glyma.06G275500 10.0kb upstream 10.0kb upstream 11325 true Chr06: 46642915-46654239 Glycine max
Glyma.06G275500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46644240-46654239 Glycine max
Glyma.06G275500 10.0kb downstream 10.0kb downstream 11325 true Chr06: 46632915-46644239 Glycine max
Glyma.06G275500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46632915-46642914 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310767 5265 Fabidae View MSA
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.7648 0.0 47.6688   High
cufflinks 1.2653 0.0 4.49899    
cufflinks 10.3193 0.0 28.4432   High
cufflinks 1.86113 0.0 6.38637    
cufflinks 1.46374 0.0 5.15927    
cufflinks 1.41141 0.0 4.97957    
cufflinks 0.945138 0.0 3.43353    
cufflinks 2.25074 0.0 7.57324    
cufflinks 2.2651 0.0 7.62867    
cufflinks 1.673       Low
cufflinks 31.541     High High
cufflinks 8.045     High  
cufflinks 0.792       Low
cufflinks 0.707       Low
cufflinks 28.134     High High
cufflinks 10.916     High  
cufflinks 1.783        
cufflinks 2.083        
cufflinks 1.952        
cufflinks 19.261     High  
cufflinks 17.621     High  
cufflinks 11.866     High  
cufflinks 4.386        
cufflinks 21.029     High  
cufflinks 15.219     High  
cufflinks 11.007     High  

0 Strain