Gene : Glyma.06G275700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11879//PTHR11879:SF18 - ASPARTATE AMINOTRANSFERASE Genomic Order:  2757
Name:  ? Glyma.06G275700 Secondary Identifier:  ? PAC:30551577
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ASPARTATE-DEG1-PWY Glycine max pathologic  
Gmax ASPARTATESYN-PWY Glycine max pathologic  
Gmax PWY-3001 Glycine max pathologic  
Gmax PWY-7115 Glycine max pathologic  
Gmax PWY-7117 Glycine max pathologic  
Gmax THRESYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G275700 0.5kb upstream 0.5kb upstream 7635 true Chr06: 46668241-46675875 Glycine max
Glyma.06G275700 0.5kb upstream 0.5kb upstream 500 false Chr06: 46668241-46668740 Glycine max
Glyma.06G275700 0.5kb downstream 0.5kb downstream 7635 true Chr06: 46668741-46676375 Glycine max
Glyma.06G275700 0.5kb downstream 0.5kb downstream 500 false Chr06: 46675876-46676375 Glycine max
Glyma.06G275700 1.0kb upstream 1.0kb upstream 8135 true Chr06: 46667741-46675875 Glycine max
Glyma.06G275700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46667741-46668740 Glycine max
Glyma.06G275700 1.0kb downstream 1.0kb downstream 8135 true Chr06: 46668741-46676875 Glycine max
Glyma.06G275700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46675876-46676875 Glycine max
Glyma.06G275700 2.0kb upstream 2.0kb upstream 9135 true Chr06: 46666741-46675875 Glycine max
Glyma.06G275700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46666741-46668740 Glycine max
Glyma.06G275700 2.0kb downstream 2.0kb downstream 9135 true Chr06: 46668741-46677875 Glycine max
Glyma.06G275700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46675876-46677875 Glycine max
Glyma.06G275700 5.0kb upstream 5.0kb upstream 12135 true Chr06: 46663741-46675875 Glycine max
Glyma.06G275700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46663741-46668740 Glycine max
Glyma.06G275700 5.0kb downstream 5.0kb downstream 12135 true Chr06: 46668741-46680875 Glycine max
Glyma.06G275700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46675876-46680875 Glycine max
Glyma.06G275700 10.0kb upstream 10.0kb upstream 17135 true Chr06: 46658741-46675875 Glycine max
Glyma.06G275700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46658741-46668740 Glycine max
Glyma.06G275700 10.0kb downstream 10.0kb downstream 17135 true Chr06: 46668741-46685875 Glycine max
Glyma.06G275700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46675876-46685875 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301166 5265 Fabidae View MSA
124063482 5270 Rosid View MSA
123737145 5271 Pentapetalae View MSA
122793092 5272 Eudicot View MSA
122046072 5273 Angiosperm View MSA
121344214 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.9232 0.0 61.3117 High  
cufflinks 5.92539 0.0 16.8653   Low
cufflinks 34.0712 0.0 92.8869 High High
cufflinks 13.1308 0.0 35.229    
cufflinks 13.851 0.0 37.1004    
cufflinks 12.1572 0.0 32.7094    
cufflinks 21.6257 0.0 57.7494    
cufflinks 5.35266 0.0 15.4009   Low
cufflinks 6.26187 0.0 17.6918   Low
cufflinks 2.573        
cufflinks 3.703        
cufflinks 6.955       High
cufflinks 4.943        
cufflinks 5.312        
cufflinks 4.194        
cufflinks 3.206        
cufflinks 2.208       Low
cufflinks 7.576     High High
cufflinks 1.966       Low
cufflinks 5.084        
cufflinks 4.83        
cufflinks 3.547        
cufflinks 1.648       Low
cufflinks 3.77        
cufflinks 3.989        
cufflinks 3.099        

0 Strain