Gene : PhHAL.1G340400 P. hallii HAL v2.1
Defline:  (1 of 1) 4.6.1.12 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase / MECDP-synthase Genomic Order:  2724
Name:  ? PhHAL.1G340400 Secondary Identifier:  ? PAC:40412953
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-7560 Panicum hallii HAL pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.1G340400 0.5kb upstream 0.5kb upstream 2542 true Chr01: 51448582-51451123 Panicum hallii HAL
PhHAL.1G340400 0.5kb upstream 0.5kb upstream 500 false Chr01: 51450624-51451123 Panicum hallii HAL
PhHAL.1G340400 0.5kb downstream 0.5kb downstream 2542 true Chr01: 51448082-51450623 Panicum hallii HAL
PhHAL.1G340400 0.5kb downstream 0.5kb downstream 500 false Chr01: 51448082-51448581 Panicum hallii HAL
PhHAL.1G340400 1.0kb upstream 1.0kb upstream 3042 true Chr01: 51448582-51451623 Panicum hallii HAL
PhHAL.1G340400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51450624-51451623 Panicum hallii HAL
PhHAL.1G340400 1.0kb downstream 1.0kb downstream 3042 true Chr01: 51447582-51450623 Panicum hallii HAL
PhHAL.1G340400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51447582-51448581 Panicum hallii HAL
PhHAL.1G340400 2.0kb upstream 2.0kb upstream 4042 true Chr01: 51448582-51452623 Panicum hallii HAL
PhHAL.1G340400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51450624-51452623 Panicum hallii HAL
PhHAL.1G340400 2.0kb downstream 2.0kb downstream 4042 true Chr01: 51446582-51450623 Panicum hallii HAL
PhHAL.1G340400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51446582-51448581 Panicum hallii HAL
PhHAL.1G340400 5.0kb upstream 5.0kb upstream 7042 true Chr01: 51448582-51455623 Panicum hallii HAL
PhHAL.1G340400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51450624-51455623 Panicum hallii HAL
PhHAL.1G340400 5.0kb downstream 5.0kb downstream 7042 true Chr01: 51443582-51450623 Panicum hallii HAL
PhHAL.1G340400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51443582-51448581 Panicum hallii HAL
PhHAL.1G340400 10.0kb upstream 10.0kb upstream 12042 true Chr01: 51448582-51460623 Panicum hallii HAL
PhHAL.1G340400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51450624-51460623 Panicum hallii HAL
PhHAL.1G340400 10.0kb downstream 10.0kb downstream 12042 true Chr01: 51438582-51450623 Panicum hallii HAL
PhHAL.1G340400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51438582-51448581 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192729 5267 Panicoideae View MSA
124578678 5269 Grass View MSA
122042234 5273 Angiosperm View MSA
121344039 5274 Embryophyte View MSA
123423768 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier