Gene : PhHAL.1G363600 P. hallii HAL v2.1

Defline:  (1 of 1) PTHR10210:SF34 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 4 Genomic Order:  2948
Name:  ? PhHAL.1G363600 Secondary Identifier:  ? PAC:40414794

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY0-662 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.1G363600 0.5kb upstream 0.5kb upstream 3480 true Chr01: 52846458-52849937 Panicum hallii HAL
PhHAL.1G363600 0.5kb upstream 0.5kb upstream 500 false Chr01: 52846458-52846957 Panicum hallii HAL
PhHAL.1G363600 0.5kb downstream 0.5kb downstream 3480 true Chr01: 52846958-52850437 Panicum hallii HAL
PhHAL.1G363600 0.5kb downstream 0.5kb downstream 500 false Chr01: 52849938-52850437 Panicum hallii HAL
PhHAL.1G363600 1.0kb upstream 1.0kb upstream 3980 true Chr01: 52845958-52849937 Panicum hallii HAL
PhHAL.1G363600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52845958-52846957 Panicum hallii HAL
PhHAL.1G363600 1.0kb downstream 1.0kb downstream 3980 true Chr01: 52846958-52850937 Panicum hallii HAL
PhHAL.1G363600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52849938-52850937 Panicum hallii HAL
PhHAL.1G363600 2.0kb upstream 2.0kb upstream 4980 true Chr01: 52844958-52849937 Panicum hallii HAL
PhHAL.1G363600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52844958-52846957 Panicum hallii HAL
PhHAL.1G363600 2.0kb downstream 2.0kb downstream 4980 true Chr01: 52846958-52851937 Panicum hallii HAL
PhHAL.1G363600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52849938-52851937 Panicum hallii HAL
PhHAL.1G363600 5.0kb upstream 5.0kb upstream 7980 true Chr01: 52841958-52849937 Panicum hallii HAL
PhHAL.1G363600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52841958-52846957 Panicum hallii HAL
PhHAL.1G363600 5.0kb downstream 5.0kb downstream 7980 true Chr01: 52846958-52854937 Panicum hallii HAL
PhHAL.1G363600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52849938-52854937 Panicum hallii HAL
PhHAL.1G363600 10.0kb upstream 10.0kb upstream 12980 true Chr01: 52836958-52849937 Panicum hallii HAL
PhHAL.1G363600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52836958-52846957 Panicum hallii HAL
PhHAL.1G363600 10.0kb downstream 10.0kb downstream 12980 true Chr01: 52846958-52859937 Panicum hallii HAL
PhHAL.1G363600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52849938-52859937 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196218 5267 Panicoideae View MSA
124573166 5269 Grass View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier