Gene : Glyma.06G323800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23344:SF28 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1 Genomic Order:  3238
Name:  ? Glyma.06G323800 Secondary Identifier:  ? PAC:30553469
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7409 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G323800 0.5kb upstream 0.5kb upstream 5234 true Chr06: 51155236-51160469 Glycine max
Glyma.06G323800 0.5kb upstream 0.5kb upstream 500 false Chr06: 51155236-51155735 Glycine max
Glyma.06G323800 0.5kb downstream 0.5kb downstream 5234 true Chr06: 51155736-51160969 Glycine max
Glyma.06G323800 0.5kb downstream 0.5kb downstream 500 false Chr06: 51160470-51160969 Glycine max
Glyma.06G323800 1.0kb upstream 1.0kb upstream 5734 true Chr06: 51154736-51160469 Glycine max
Glyma.06G323800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51154736-51155735 Glycine max
Glyma.06G323800 1.0kb downstream 1.0kb downstream 5734 true Chr06: 51155736-51161469 Glycine max
Glyma.06G323800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51160470-51161469 Glycine max
Glyma.06G323800 2.0kb upstream 2.0kb upstream 6734 true Chr06: 51153736-51160469 Glycine max
Glyma.06G323800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51153736-51155735 Glycine max
Glyma.06G323800 2.0kb downstream 2.0kb downstream 6734 true Chr06: 51155736-51162469 Glycine max
Glyma.06G323800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51160470-51162469 Glycine max
Glyma.06G323800 5.0kb upstream 5.0kb upstream 9734 true Chr06: 51150736-51160469 Glycine max
Glyma.06G323800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51150736-51155735 Glycine max
Glyma.06G323800 5.0kb downstream 5.0kb downstream 9734 true Chr06: 51155736-51165469 Glycine max
Glyma.06G323800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51160470-51165469 Glycine max
Glyma.06G323800 10.0kb upstream 10.0kb upstream 14734 true Chr06: 51145736-51160469 Glycine max
Glyma.06G323800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51145736-51155735 Glycine max
Glyma.06G323800 10.0kb downstream 10.0kb downstream 14734 true Chr06: 51155736-51170469 Glycine max
Glyma.06G323800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51160470-51170469 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300579 5265 Fabidae View MSA
124067594 5270 Rosid View MSA
123739367 5271 Pentapetalae View MSA
122793263 5272 Eudicot View MSA
122047219 5273 Angiosperm View MSA
121349016 5274 Embryophyte View MSA
123427418 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.86023 0.0 9.53068    
cufflinks 2.53274 0.0 8.55137    
cufflinks 10.5012 0.0 29.3942   High
cufflinks 3.07934 0.0 10.1488    
cufflinks 3.65228 0.0 11.7651    
cufflinks 3.02052 0.0 9.98426    
cufflinks 2.90899 0.0 9.69282    
cufflinks 3.16111 0.0 10.3783    
cufflinks 2.19529 0.0 7.52887    
cufflinks 0.911        
cufflinks 0.267       Low
cufflinks 2.107       High
cufflinks 1.067        
cufflinks 1.619       High
cufflinks 0.344       Low
cufflinks 0.997        
cufflinks 0.355       Low
cufflinks 1.313        
cufflinks 1.37        
cufflinks 0.933        
cufflinks 0.412       Low
cufflinks 1.027        
cufflinks 1.151        
cufflinks 0.365       Low
cufflinks 0.972        
cufflinks 0.431        

0 Strain