Gene : Glyma.06G324400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11945//PTHR11945:SF238 - MADS BOX PROTEIN Genomic Order:  3244
Name:  ? Glyma.06G324400 Secondary Identifier:  ? PAC:30549549
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G324400 0.5kb upstream 0.5kb upstream 10043 true Chr06: 51204572-51214614 Glycine max
Glyma.06G324400 0.5kb upstream 0.5kb upstream 500 false Chr06: 51204572-51205071 Glycine max
Glyma.06G324400 0.5kb downstream 0.5kb downstream 10043 true Chr06: 51205072-51215114 Glycine max
Glyma.06G324400 0.5kb downstream 0.5kb downstream 500 false Chr06: 51214615-51215114 Glycine max
Glyma.06G324400 1.0kb upstream 1.0kb upstream 10543 true Chr06: 51204072-51214614 Glycine max
Glyma.06G324400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51204072-51205071 Glycine max
Glyma.06G324400 1.0kb downstream 1.0kb downstream 10543 true Chr06: 51205072-51215614 Glycine max
Glyma.06G324400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51214615-51215614 Glycine max
Glyma.06G324400 2.0kb upstream 2.0kb upstream 11543 true Chr06: 51203072-51214614 Glycine max
Glyma.06G324400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51203072-51205071 Glycine max
Glyma.06G324400 2.0kb downstream 2.0kb downstream 11543 true Chr06: 51205072-51216614 Glycine max
Glyma.06G324400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51214615-51216614 Glycine max
Glyma.06G324400 5.0kb upstream 5.0kb upstream 14543 true Chr06: 51200072-51214614 Glycine max
Glyma.06G324400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51200072-51205071 Glycine max
Glyma.06G324400 5.0kb downstream 5.0kb downstream 14543 true Chr06: 51205072-51219614 Glycine max
Glyma.06G324400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51214615-51219614 Glycine max
Glyma.06G324400 10.0kb upstream 10.0kb upstream 19543 true Chr06: 51195072-51214614 Glycine max
Glyma.06G324400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51195072-51205071 Glycine max
Glyma.06G324400 10.0kb downstream 10.0kb downstream 19543 true Chr06: 51205072-51224614 Glycine max
Glyma.06G324400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51214615-51224614 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307019 5265 Fabidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0290529 0.0 0.138041 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.73572 0.0 47.6715    
cufflinks 79.2294 0.0 466.008 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0769783 0.0 0.315942 Low  
cufflinks 150.334 0.0 1080.8 High High
cufflinks 0.0276529 0.0 0.138955 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.389        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.083        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.267        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain