Gene : PhHAL.1G323800 P. hallii HAL v2.1

Defline:  (1 of 1) 4.2.1.116//4.2.1.18 - 3-hydroxypropionyl-CoA dehydratase / 3-hydroxypropionyl-CoA hydro-lyase // Methylglutaconyl-CoA hydratase Genomic Order:  2566
Name:  ? PhHAL.1G323800 Secondary Identifier:  ? PAC:40414460

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL LEU-DEG2-PWY Panicum hallii HAL pathologic  
PhalliiHAL PWY-7574 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.1G323800 0.5kb upstream 0.5kb upstream 4441 true Chr01: 50224009-50228449 Panicum hallii HAL
PhHAL.1G323800 0.5kb upstream 0.5kb upstream 500 false Chr01: 50224009-50224508 Panicum hallii HAL
PhHAL.1G323800 0.5kb downstream 0.5kb downstream 4441 true Chr01: 50224509-50228949 Panicum hallii HAL
PhHAL.1G323800 0.5kb downstream 0.5kb downstream 500 false Chr01: 50228450-50228949 Panicum hallii HAL
PhHAL.1G323800 1.0kb upstream 1.0kb upstream 4941 true Chr01: 50223509-50228449 Panicum hallii HAL
PhHAL.1G323800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50223509-50224508 Panicum hallii HAL
PhHAL.1G323800 1.0kb downstream 1.0kb downstream 4941 true Chr01: 50224509-50229449 Panicum hallii HAL
PhHAL.1G323800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50228450-50229449 Panicum hallii HAL
PhHAL.1G323800 2.0kb upstream 2.0kb upstream 5941 true Chr01: 50222509-50228449 Panicum hallii HAL
PhHAL.1G323800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50222509-50224508 Panicum hallii HAL
PhHAL.1G323800 2.0kb downstream 2.0kb downstream 5941 true Chr01: 50224509-50230449 Panicum hallii HAL
PhHAL.1G323800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50228450-50230449 Panicum hallii HAL
PhHAL.1G323800 5.0kb upstream 5.0kb upstream 8941 true Chr01: 50219509-50228449 Panicum hallii HAL
PhHAL.1G323800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50219509-50224508 Panicum hallii HAL
PhHAL.1G323800 5.0kb downstream 5.0kb downstream 8941 true Chr01: 50224509-50233449 Panicum hallii HAL
PhHAL.1G323800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50228450-50233449 Panicum hallii HAL
PhHAL.1G323800 10.0kb upstream 10.0kb upstream 13941 true Chr01: 50214509-50228449 Panicum hallii HAL
PhHAL.1G323800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50214509-50224508 Panicum hallii HAL
PhHAL.1G323800 10.0kb downstream 10.0kb downstream 13941 true Chr01: 50224509-50238449 Panicum hallii HAL
PhHAL.1G323800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50228450-50238449 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182924 5267 Panicoideae View MSA
124579335 5269 Grass View MSA
122045797 5273 Angiosperm View MSA
121351751 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier