Gene : Glyma.07G000500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10366//PTHR10366:SF343 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Genomic Order:  5
Name:  ? Glyma.07G000500 Secondary Identifier:  ? PAC:30494239
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5064 Glycine max pathologic  
Gmax PWY-5086 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G000500 0.5kb upstream 0.5kb upstream 13442 true Chr07: 61958-75399 Glycine max
Glyma.07G000500 0.5kb upstream 0.5kb upstream 500 false Chr07: 61958-62457 Glycine max
Glyma.07G000500 0.5kb downstream 0.5kb downstream 13442 true Chr07: 62458-75899 Glycine max
Glyma.07G000500 0.5kb downstream 0.5kb downstream 500 false Chr07: 75400-75899 Glycine max
Glyma.07G000500 1.0kb upstream 1.0kb upstream 13942 true Chr07: 61458-75399 Glycine max
Glyma.07G000500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 61458-62457 Glycine max
Glyma.07G000500 1.0kb downstream 1.0kb downstream 13942 true Chr07: 62458-76399 Glycine max
Glyma.07G000500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 75400-76399 Glycine max
Glyma.07G000500 2.0kb upstream 2.0kb upstream 14942 true Chr07: 60458-75399 Glycine max
Glyma.07G000500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 60458-62457 Glycine max
Glyma.07G000500 2.0kb downstream 2.0kb downstream 14942 true Chr07: 62458-77399 Glycine max
Glyma.07G000500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 75400-77399 Glycine max
Glyma.07G000500 5.0kb upstream 5.0kb upstream 17942 true Chr07: 57458-75399 Glycine max
Glyma.07G000500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 57458-62457 Glycine max
Glyma.07G000500 5.0kb downstream 5.0kb downstream 17942 true Chr07: 62458-80399 Glycine max
Glyma.07G000500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 75400-80399 Glycine max
Glyma.07G000500 10.0kb upstream 10.0kb upstream 22942 true Chr07: 52458-75399 Glycine max
Glyma.07G000500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 52458-62457 Glycine max
Glyma.07G000500 10.0kb downstream 10.0kb downstream 22942 true Chr07: 62458-85399 Glycine max
Glyma.07G000500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 75400-85399 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306443 5265 Fabidae View MSA
124060991 5270 Rosid View MSA
123739581 5271 Pentapetalae View MSA
122792894 5272 Eudicot View MSA
122046159 5273 Angiosperm View MSA
121349944 5274 Embryophyte View MSA
123424676 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0931 0.0 65.5426   High
cufflinks 1.77417 0.0 10.301    
cufflinks 1.48894 0.0 9.29832    
cufflinks 1.75343 0.0 10.0071    
cufflinks 2.17629 0.0 8.91413    
cufflinks 0.444982 0.0 4.23777   Low
cufflinks 3.83971 0.0 14.8811    
cufflinks 1.78075 0.0 11.148    
cufflinks 0.485284 0.0 2.88059   Low
cufflinks 0.174        
cufflinks 0.001     Low Low
cufflinks 0.371        
cufflinks 0.118        
cufflinks 0.098        
cufflinks 0.008     Low Low
cufflinks 0.659        
cufflinks 0.014     Low  
cufflinks 1.057       High
cufflinks 0.248        
cufflinks 0.701        
cufflinks 0.01     Low  
cufflinks 0.823        
cufflinks 0.511        
cufflinks 0.003     Low Low
cufflinks 1.049       High
cufflinks 0.014     Low  

0 Strain