Gene : Glyma.07G002100 G. max Wm82.a2.v1
Defline:  (1 of 23) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  21
Name:  ? Glyma.07G002100 Secondary Identifier:  ? PAC:30491779
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G002100 0.5kb upstream 0.5kb upstream 3303 true Chr07: 186943-190245 Glycine max
Glyma.07G002100 0.5kb upstream 0.5kb upstream 500 false Chr07: 189746-190245 Glycine max
Glyma.07G002100 0.5kb downstream 0.5kb downstream 3303 true Chr07: 186443-189745 Glycine max
Glyma.07G002100 0.5kb downstream 0.5kb downstream 500 false Chr07: 186443-186942 Glycine max
Glyma.07G002100 1.0kb upstream 1.0kb upstream 3803 true Chr07: 186943-190745 Glycine max
Glyma.07G002100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 189746-190745 Glycine max
Glyma.07G002100 1.0kb downstream 1.0kb downstream 3803 true Chr07: 185943-189745 Glycine max
Glyma.07G002100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 185943-186942 Glycine max
Glyma.07G002100 2.0kb upstream 2.0kb upstream 4803 true Chr07: 186943-191745 Glycine max
Glyma.07G002100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 189746-191745 Glycine max
Glyma.07G002100 2.0kb downstream 2.0kb downstream 4803 true Chr07: 184943-189745 Glycine max
Glyma.07G002100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 184943-186942 Glycine max
Glyma.07G002100 5.0kb upstream 5.0kb upstream 7803 true Chr07: 186943-194745 Glycine max
Glyma.07G002100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 189746-194745 Glycine max
Glyma.07G002100 5.0kb downstream 5.0kb downstream 7803 true Chr07: 181943-189745 Glycine max
Glyma.07G002100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 181943-186942 Glycine max
Glyma.07G002100 10.0kb upstream 10.0kb upstream 12803 true Chr07: 186943-199745 Glycine max
Glyma.07G002100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 189746-199745 Glycine max
Glyma.07G002100 10.0kb downstream 10.0kb downstream 12803 true Chr07: 176943-189745 Glycine max
Glyma.07G002100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 176943-186942 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309827 5265 Fabidae View MSA
124069278 5270 Rosid View MSA
123746031 5271 Pentapetalae View MSA
122794161 5272 Eudicot View MSA
122048441 5273 Angiosperm View MSA
121348258 5274 Embryophyte View MSA
123425771 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.138 0.0 46.5375   High
cufflinks 10.3056 0.0 37.9702    
cufflinks 4.5295 0.0 18.5236    
cufflinks 8.12315 0.0 31.5827    
cufflinks 4.27016 0.0 17.2635    
cufflinks 3.49825 0.0 11.6758   Low
cufflinks 11.8061 0.0 42.4996   High
cufflinks 8.13746 0.0 31.5767    
cufflinks 4.42497 0.0 17.5758    
cufflinks 2.18        
cufflinks 0.148       Low
cufflinks 1.535        
cufflinks 0.82        
cufflinks 0.877        
cufflinks 0.566        
cufflinks 5.96       High
cufflinks 0.278       Low
cufflinks 2.268        
cufflinks 2.573        
cufflinks 8.122     High High
cufflinks 0.228       Low
cufflinks 6.446       High
cufflinks 5.024        
cufflinks 0.132       Low
cufflinks 7.471     High High
cufflinks 0.354        

0 Strain