Gene : Glyma.06G315700 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR11527//PTHR11527:SF131 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY Genomic Order:  3157
Name:  ? Glyma.06G315700 Secondary Identifier:  ? PAC:30551133
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G315700 0.5kb upstream 0.5kb upstream 2640 true Chr06: 50485735-50488374 Glycine max
Glyma.06G315700 0.5kb upstream 0.5kb upstream 500 false Chr06: 50485735-50486234 Glycine max
Glyma.06G315700 0.5kb downstream 0.5kb downstream 2640 true Chr06: 50486235-50488874 Glycine max
Glyma.06G315700 0.5kb downstream 0.5kb downstream 500 false Chr06: 50488375-50488874 Glycine max
Glyma.06G315700 1.0kb upstream 1.0kb upstream 3140 true Chr06: 50485235-50488374 Glycine max
Glyma.06G315700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50485235-50486234 Glycine max
Glyma.06G315700 1.0kb downstream 1.0kb downstream 3140 true Chr06: 50486235-50489374 Glycine max
Glyma.06G315700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50488375-50489374 Glycine max
Glyma.06G315700 2.0kb upstream 2.0kb upstream 4140 true Chr06: 50484235-50488374 Glycine max
Glyma.06G315700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50484235-50486234 Glycine max
Glyma.06G315700 2.0kb downstream 2.0kb downstream 4140 true Chr06: 50486235-50490374 Glycine max
Glyma.06G315700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50488375-50490374 Glycine max
Glyma.06G315700 5.0kb upstream 5.0kb upstream 7140 true Chr06: 50481235-50488374 Glycine max
Glyma.06G315700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50481235-50486234 Glycine max
Glyma.06G315700 5.0kb downstream 5.0kb downstream 7140 true Chr06: 50486235-50493374 Glycine max
Glyma.06G315700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50488375-50493374 Glycine max
Glyma.06G315700 10.0kb upstream 10.0kb upstream 12140 true Chr06: 50476235-50488374 Glycine max
Glyma.06G315700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50476235-50486234 Glycine max
Glyma.06G315700 10.0kb downstream 10.0kb downstream 12140 true Chr06: 50486235-50498374 Glycine max
Glyma.06G315700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50488375-50498374 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297682 5265 Fabidae View MSA
124074314 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.3143 0.0 1.18367    
cufflinks 0.611908 0.0 2.22582    
cufflinks 0.851058 0.0 3.02241    
cufflinks 0.591366 0.0 2.15171    
cufflinks 1.26119 0.0 4.34618    
cufflinks 0.737544 0.0 2.65392    
cufflinks 0.0688347 0.0 0.275348 Low Low
cufflinks 0.853878 0.0 3.03014    
cufflinks 1.5134 0.0 5.10743   High
cufflinks 3.551       High
cufflinks 1.757        
cufflinks 1.012        
cufflinks 5.47       High
cufflinks 1.619        
cufflinks 0.13       Low
cufflinks 1.132        
cufflinks 1.244        
cufflinks 2.349        
cufflinks 0.478       Low
cufflinks 1.308        
cufflinks 2.537        
cufflinks 1.605        
cufflinks 0.785        
cufflinks 1.059        
cufflinks 1.504        
cufflinks 2.377        

0 Strain