Gene : Glyma.06G317600 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.7.1.138 - Ceramide kinase / Acylsphingosine kinase Genomic Order:  3176
Name:  ? Glyma.06G317600 Secondary Identifier:  ? PAC:30551497
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5129 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G317600 0.5kb upstream 0.5kb upstream 9009 true Chr06: 50616820-50625828 Glycine max
Glyma.06G317600 0.5kb upstream 0.5kb upstream 500 false Chr06: 50616820-50617319 Glycine max
Glyma.06G317600 0.5kb downstream 0.5kb downstream 9009 true Chr06: 50617320-50626328 Glycine max
Glyma.06G317600 0.5kb downstream 0.5kb downstream 500 false Chr06: 50625829-50626328 Glycine max
Glyma.06G317600 1.0kb upstream 1.0kb upstream 9509 true Chr06: 50616320-50625828 Glycine max
Glyma.06G317600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50616320-50617319 Glycine max
Glyma.06G317600 1.0kb downstream 1.0kb downstream 9509 true Chr06: 50617320-50626828 Glycine max
Glyma.06G317600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50625829-50626828 Glycine max
Glyma.06G317600 2.0kb upstream 2.0kb upstream 10509 true Chr06: 50615320-50625828 Glycine max
Glyma.06G317600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50615320-50617319 Glycine max
Glyma.06G317600 2.0kb downstream 2.0kb downstream 10509 true Chr06: 50617320-50627828 Glycine max
Glyma.06G317600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50625829-50627828 Glycine max
Glyma.06G317600 5.0kb upstream 5.0kb upstream 13509 true Chr06: 50612320-50625828 Glycine max
Glyma.06G317600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50612320-50617319 Glycine max
Glyma.06G317600 5.0kb downstream 5.0kb downstream 13509 true Chr06: 50617320-50630828 Glycine max
Glyma.06G317600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50625829-50630828 Glycine max
Glyma.06G317600 10.0kb upstream 10.0kb upstream 18509 true Chr06: 50607320-50625828 Glycine max
Glyma.06G317600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50607320-50617319 Glycine max
Glyma.06G317600 10.0kb downstream 10.0kb downstream 18509 true Chr06: 50617320-50635828 Glycine max
Glyma.06G317600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50625829-50635828 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308468 5265 Fabidae View MSA
124066629 5270 Rosid View MSA
123746434 5271 Pentapetalae View MSA
122791324 5272 Eudicot View MSA
122045057 5273 Angiosperm View MSA
121345163 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.17501 0.0 12.033   High
cufflinks 1.99645 0.0 6.35115    
cufflinks 6.85756 0.0 18.7387   High
cufflinks 2.56374 0.0 7.85777    
cufflinks 1.46886 0.0 4.89027    
cufflinks 2.25062 0.0 7.03995    
cufflinks 1.94371 0.0 6.23058    
cufflinks 1.68575 0.0 5.48658    
cufflinks 1.52387 0.0 5.03237    
cufflinks 0.396       Low
cufflinks 0.459        
cufflinks 1.168       High
cufflinks 0.585        
cufflinks 0.529        
cufflinks 0.348       Low
cufflinks 0.728        
cufflinks 0.399        
cufflinks 2.198       High
cufflinks 0.853        
cufflinks 0.528        
cufflinks 0.481        
cufflinks 0.609        
cufflinks 0.647        
cufflinks 0.818        
cufflinks 0.577        
cufflinks 0.526        

0 Strain