Gene : Glyma.06G317900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR15907:SF35 - GENE1000 PROTEIN-RELATED Genomic Order:  3179
Name:  ? Glyma.06G317900 Secondary Identifier:  ? PAC:30553074
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G317900 0.5kb upstream 0.5kb upstream 4662 true Chr06: 50644595-50649256 Glycine max
Glyma.06G317900 0.5kb upstream 0.5kb upstream 500 false Chr06: 50644595-50645094 Glycine max
Glyma.06G317900 0.5kb downstream 0.5kb downstream 4662 true Chr06: 50645095-50649756 Glycine max
Glyma.06G317900 0.5kb downstream 0.5kb downstream 500 false Chr06: 50649257-50649756 Glycine max
Glyma.06G317900 1.0kb upstream 1.0kb upstream 5162 true Chr06: 50644095-50649256 Glycine max
Glyma.06G317900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50644095-50645094 Glycine max
Glyma.06G317900 1.0kb downstream 1.0kb downstream 5162 true Chr06: 50645095-50650256 Glycine max
Glyma.06G317900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50649257-50650256 Glycine max
Glyma.06G317900 2.0kb upstream 2.0kb upstream 6162 true Chr06: 50643095-50649256 Glycine max
Glyma.06G317900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50643095-50645094 Glycine max
Glyma.06G317900 2.0kb downstream 2.0kb downstream 6162 true Chr06: 50645095-50651256 Glycine max
Glyma.06G317900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50649257-50651256 Glycine max
Glyma.06G317900 5.0kb upstream 5.0kb upstream 9162 true Chr06: 50640095-50649256 Glycine max
Glyma.06G317900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50640095-50645094 Glycine max
Glyma.06G317900 5.0kb downstream 5.0kb downstream 9162 true Chr06: 50645095-50654256 Glycine max
Glyma.06G317900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50649257-50654256 Glycine max
Glyma.06G317900 10.0kb upstream 10.0kb upstream 14162 true Chr06: 50635095-50649256 Glycine max
Glyma.06G317900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50635095-50645094 Glycine max
Glyma.06G317900 10.0kb downstream 10.0kb downstream 14162 true Chr06: 50645095-50659256 Glycine max
Glyma.06G317900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50649257-50659256 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309029 5265 Fabidae View MSA
124071664 5270 Rosid View MSA
123743444 5271 Pentapetalae View MSA
122790372 5272 Eudicot View MSA
122043074 5273 Angiosperm View MSA
123429155 5275 Viridiplantae View MSA
121346562 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.99775 0.0 7.01557   Low
cufflinks 4.71724 0.0 14.9931    
cufflinks 2.34073 0.0 8.0816   Low
cufflinks 6.3929 0.0 19.4022    
cufflinks 6.56966 0.0 19.8684    
cufflinks 9.10926 0.0 26.3516   High
cufflinks 5.67771 0.0 17.5444    
cufflinks 7.98201 0.0 23.4689    
cufflinks 4.4816 0.0 14.3089    
cufflinks 2.891       High
cufflinks 0.268       Low
cufflinks 1.051        
cufflinks 2.191       High
cufflinks 3.051       High
cufflinks 0.175       Low
cufflinks 1.13        
cufflinks 0.562        
cufflinks 2.095       High
cufflinks 1.677        
cufflinks 0.499        
cufflinks 0.383        
cufflinks 0.676        
cufflinks 1.211        
cufflinks 0.204       Low
cufflinks 0.698        
cufflinks 0.666        

0 Strain