Gene : Glyma.06G320400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10540:SF8 - COP9 SIGNALOSOME COMPLEX SUBUNIT 6 Genomic Order:  3204
Name:  ? Glyma.06G320400 Secondary Identifier:  ? PAC:30550936
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G320400 0.5kb upstream 0.5kb upstream 6534 true Chr06: 50905026-50911559 Glycine max
Glyma.06G320400 0.5kb upstream 0.5kb upstream 500 false Chr06: 50911060-50911559 Glycine max
Glyma.06G320400 0.5kb downstream 0.5kb downstream 6534 true Chr06: 50904526-50911059 Glycine max
Glyma.06G320400 0.5kb downstream 0.5kb downstream 500 false Chr06: 50904526-50905025 Glycine max
Glyma.06G320400 1.0kb upstream 1.0kb upstream 7034 true Chr06: 50905026-50912059 Glycine max
Glyma.06G320400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50911060-50912059 Glycine max
Glyma.06G320400 1.0kb downstream 1.0kb downstream 7034 true Chr06: 50904026-50911059 Glycine max
Glyma.06G320400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50904026-50905025 Glycine max
Glyma.06G320400 2.0kb upstream 2.0kb upstream 8034 true Chr06: 50905026-50913059 Glycine max
Glyma.06G320400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50911060-50913059 Glycine max
Glyma.06G320400 2.0kb downstream 2.0kb downstream 8034 true Chr06: 50903026-50911059 Glycine max
Glyma.06G320400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50903026-50905025 Glycine max
Glyma.06G320400 5.0kb upstream 5.0kb upstream 11034 true Chr06: 50905026-50916059 Glycine max
Glyma.06G320400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50911060-50916059 Glycine max
Glyma.06G320400 5.0kb downstream 5.0kb downstream 11034 true Chr06: 50900026-50911059 Glycine max
Glyma.06G320400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50900026-50905025 Glycine max
Glyma.06G320400 10.0kb upstream 10.0kb upstream 16034 true Chr06: 50905026-50921059 Glycine max
Glyma.06G320400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50911060-50921059 Glycine max
Glyma.06G320400 10.0kb downstream 10.0kb downstream 16034 true Chr06: 50895026-50911059 Glycine max
Glyma.06G320400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50895026-50905025 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302157 5265 Fabidae View MSA
124066066 5270 Rosid View MSA
123746091 5271 Pentapetalae View MSA
122792490 5272 Eudicot View MSA
122050330 5273 Angiosperm View MSA
121345331 5274 Embryophyte View MSA
123424156 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5484 0.0 28.9904    
cufflinks 9.98221 0.0 27.5537    
cufflinks 7.51044 0.0 21.2807   Low
cufflinks 11.34 0.0 30.9737   High
cufflinks 10.5513 0.0 28.9808    
cufflinks 8.25454 0.0 23.1841   Low
cufflinks 10.4918 0.0 28.8343    
cufflinks 8.99901 0.0 25.044    
cufflinks 8.99247 0.0 25.0413    
cufflinks 2.146        
cufflinks 1.085       Low
cufflinks 1.76        
cufflinks 2.116        
cufflinks 2.705       High
cufflinks 1.149       Low
cufflinks 1.939        
cufflinks 1.091       Low
cufflinks 2.105        
cufflinks 2.44       High
cufflinks 2.041        
cufflinks 1.302        
cufflinks 2.095        
cufflinks 2.042        
cufflinks 1.292        
cufflinks 1.811        
cufflinks 1.008       Low

0 Strain