Gene : PhHAL.1G425600 P. hallii HAL v2.1

Defline:  (1 of 1) PTHR14363//PTHR14363:SF16 - HEPARANASE-RELATED // HEPARANASE-LIKE PROTEIN 3 Genomic Order:  3548
Name:  ? PhHAL.1G425600 Secondary Identifier:  ? PAC:40415680

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-7213 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7214 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7445 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.1G425600 0.5kb upstream 0.5kb upstream 5064 true Chr01: 57000650-57005713 Panicum hallii HAL
PhHAL.1G425600 0.5kb upstream 0.5kb upstream 500 false Chr01: 57000650-57001149 Panicum hallii HAL
PhHAL.1G425600 0.5kb downstream 0.5kb downstream 5064 true Chr01: 57001150-57006213 Panicum hallii HAL
PhHAL.1G425600 0.5kb downstream 0.5kb downstream 500 false Chr01: 57005714-57006213 Panicum hallii HAL
PhHAL.1G425600 1.0kb upstream 1.0kb upstream 5564 true Chr01: 57000150-57005713 Panicum hallii HAL
PhHAL.1G425600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 57000150-57001149 Panicum hallii HAL
PhHAL.1G425600 1.0kb downstream 1.0kb downstream 5564 true Chr01: 57001150-57006713 Panicum hallii HAL
PhHAL.1G425600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 57005714-57006713 Panicum hallii HAL
PhHAL.1G425600 2.0kb upstream 2.0kb upstream 6564 true Chr01: 56999150-57005713 Panicum hallii HAL
PhHAL.1G425600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 56999150-57001149 Panicum hallii HAL
PhHAL.1G425600 2.0kb downstream 2.0kb downstream 6564 true Chr01: 57001150-57007713 Panicum hallii HAL
PhHAL.1G425600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 57005714-57007713 Panicum hallii HAL
PhHAL.1G425600 5.0kb upstream 5.0kb upstream 9564 true Chr01: 56996150-57005713 Panicum hallii HAL
PhHAL.1G425600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 56996150-57001149 Panicum hallii HAL
PhHAL.1G425600 5.0kb downstream 5.0kb downstream 9564 true Chr01: 57001150-57010713 Panicum hallii HAL
PhHAL.1G425600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 57005714-57010713 Panicum hallii HAL
PhHAL.1G425600 10.0kb upstream 10.0kb upstream 14564 true Chr01: 56991150-57005713 Panicum hallii HAL
PhHAL.1G425600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 56991150-57001149 Panicum hallii HAL
PhHAL.1G425600 10.0kb downstream 10.0kb downstream 14564 true Chr01: 57001150-57015713 Panicum hallii HAL
PhHAL.1G425600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 57005714-57015713 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178103 5267 Panicoideae View MSA
124579874 5269 Grass View MSA
122042729 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier