Gene : Glyma.06G310400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13395 - SISTER CHROMATID COHESION PROTEIN DCC1-RELATED Genomic Order:  3104
Name:  ? Glyma.06G310400 Secondary Identifier:  ? PAC:30550572
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G310400 0.5kb upstream 0.5kb upstream 4485 true Chr06: 49879838-49884322 Glycine max
Glyma.06G310400 0.5kb upstream 0.5kb upstream 500 false Chr06: 49879838-49880337 Glycine max
Glyma.06G310400 0.5kb downstream 0.5kb downstream 4485 true Chr06: 49880338-49884822 Glycine max
Glyma.06G310400 0.5kb downstream 0.5kb downstream 500 false Chr06: 49884323-49884822 Glycine max
Glyma.06G310400 1.0kb upstream 1.0kb upstream 4985 true Chr06: 49879338-49884322 Glycine max
Glyma.06G310400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49879338-49880337 Glycine max
Glyma.06G310400 1.0kb downstream 1.0kb downstream 4985 true Chr06: 49880338-49885322 Glycine max
Glyma.06G310400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49884323-49885322 Glycine max
Glyma.06G310400 2.0kb upstream 2.0kb upstream 5985 true Chr06: 49878338-49884322 Glycine max
Glyma.06G310400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49878338-49880337 Glycine max
Glyma.06G310400 2.0kb downstream 2.0kb downstream 5985 true Chr06: 49880338-49886322 Glycine max
Glyma.06G310400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49884323-49886322 Glycine max
Glyma.06G310400 5.0kb upstream 5.0kb upstream 8985 true Chr06: 49875338-49884322 Glycine max
Glyma.06G310400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49875338-49880337 Glycine max
Glyma.06G310400 5.0kb downstream 5.0kb downstream 8985 true Chr06: 49880338-49889322 Glycine max
Glyma.06G310400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49884323-49889322 Glycine max
Glyma.06G310400 10.0kb upstream 10.0kb upstream 13985 true Chr06: 49870338-49884322 Glycine max
Glyma.06G310400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49870338-49880337 Glycine max
Glyma.06G310400 10.0kb downstream 10.0kb downstream 13985 true Chr06: 49880338-49894322 Glycine max
Glyma.06G310400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49884323-49894322 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301606 5265 Fabidae View MSA
124066083 5270 Rosid View MSA
123738990 5271 Pentapetalae View MSA
122785967 5272 Eudicot View MSA
122045586 5273 Angiosperm View MSA
121346207 5274 Embryophyte View MSA
123425480 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.66353 0.0 3.94905   Low
cufflinks 3.89842 0.0 14.6051   High
cufflinks 0.775593 0.0 4.38823   Low
cufflinks 1.84988 0.0 8.7737    
cufflinks 1.65988 0.0 8.27584    
cufflinks 1.57693 0.0 8.05937    
cufflinks 3.45449 0.0 13.6244   High
cufflinks 1.72651 0.0 8.41387    
cufflinks 3.3052 0.0 13.3746    
cufflinks 0.367        
cufflinks 0.238       Low
cufflinks 0.529        
cufflinks 0.559        
cufflinks 0.545        
cufflinks 0.738       High
cufflinks 0.521        
cufflinks 0.173       Low
cufflinks 0.414        
cufflinks 1.238       High
cufflinks 0.398        
cufflinks 0.225       Low
cufflinks 0.513        
cufflinks 0.875       High
cufflinks 0.299        
cufflinks 0.548        
cufflinks 0.203       Low

0 Strain