Gene : Glyma.06G311400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10252//PTHR10252:SF40 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED Genomic Order:  3114
Name:  ? Glyma.06G311400 Secondary Identifier:  ? PAC:30550686
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G311400 0.5kb upstream 0.5kb upstream 5019 true Chr06: 49984980-49989998 Glycine max
Glyma.06G311400 0.5kb upstream 0.5kb upstream 500 false Chr06: 49989499-49989998 Glycine max
Glyma.06G311400 0.5kb downstream 0.5kb downstream 5019 true Chr06: 49984480-49989498 Glycine max
Glyma.06G311400 0.5kb downstream 0.5kb downstream 500 false Chr06: 49984480-49984979 Glycine max
Glyma.06G311400 1.0kb upstream 1.0kb upstream 5519 true Chr06: 49984980-49990498 Glycine max
Glyma.06G311400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49989499-49990498 Glycine max
Glyma.06G311400 1.0kb downstream 1.0kb downstream 5519 true Chr06: 49983980-49989498 Glycine max
Glyma.06G311400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49983980-49984979 Glycine max
Glyma.06G311400 2.0kb upstream 2.0kb upstream 6519 true Chr06: 49984980-49991498 Glycine max
Glyma.06G311400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49989499-49991498 Glycine max
Glyma.06G311400 2.0kb downstream 2.0kb downstream 6519 true Chr06: 49982980-49989498 Glycine max
Glyma.06G311400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49982980-49984979 Glycine max
Glyma.06G311400 5.0kb upstream 5.0kb upstream 9519 true Chr06: 49984980-49994498 Glycine max
Glyma.06G311400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49989499-49994498 Glycine max
Glyma.06G311400 5.0kb downstream 5.0kb downstream 9519 true Chr06: 49979980-49989498 Glycine max
Glyma.06G311400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49979980-49984979 Glycine max
Glyma.06G311400 10.0kb upstream 10.0kb upstream 14519 true Chr06: 49984980-49999498 Glycine max
Glyma.06G311400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49989499-49999498 Glycine max
Glyma.06G311400 10.0kb downstream 10.0kb downstream 14519 true Chr06: 49974980-49989498 Glycine max
Glyma.06G311400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49974980-49984979 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309450 5265 Fabidae View MSA
124069286 5270 Rosid View MSA
123742462 5271 Pentapetalae View MSA
122792661 5272 Eudicot View MSA
122049084 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121345521 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.99626 0.0 19.9422   Low
cufflinks 8.12623 0.0 22.8259    
cufflinks 9.64985 0.0 26.6597   High
cufflinks 8.26157 0.0 23.1399    
cufflinks 8.72509 0.0 24.2947    
cufflinks 10.0939 0.0 27.7807   High
cufflinks 9.07947 0.0 25.2392    
cufflinks 8.25506 0.0 23.1211    
cufflinks 7.74613 0.0 21.844    
cufflinks 2.038       Low
cufflinks 2.823        
cufflinks 2.546        
cufflinks 2.604        
cufflinks 2.278       Low
cufflinks 2.663        
cufflinks 2.822        
cufflinks 3.058        
cufflinks 2.669        
cufflinks 2.847        
cufflinks 2.57        
cufflinks 2.493        
cufflinks 3.03        
cufflinks 3.303       High
cufflinks 3.08       High
cufflinks 2.567        
cufflinks 3.025        

0 Strain