Gene : PhHAL.1G452700 P. hallii HAL v2.1
Defline:  (1 of 2) 3.4.22.1 - Cathepsin B / Cathepsin B1 Genomic Order:  3815
Name:  ? PhHAL.1G452700 Secondary Identifier:  ? PAC:40416466
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.1G452700 0.5kb upstream 0.5kb upstream 3778 true Chr01: 58602497-58606274 Panicum hallii HAL
PhHAL.1G452700 0.5kb upstream 0.5kb upstream 500 false Chr01: 58605775-58606274 Panicum hallii HAL
PhHAL.1G452700 0.5kb downstream 0.5kb downstream 3778 true Chr01: 58601997-58605774 Panicum hallii HAL
PhHAL.1G452700 0.5kb downstream 0.5kb downstream 500 false Chr01: 58601997-58602496 Panicum hallii HAL
PhHAL.1G452700 1.0kb upstream 1.0kb upstream 4278 true Chr01: 58602497-58606774 Panicum hallii HAL
PhHAL.1G452700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 58605775-58606774 Panicum hallii HAL
PhHAL.1G452700 1.0kb downstream 1.0kb downstream 4278 true Chr01: 58601497-58605774 Panicum hallii HAL
PhHAL.1G452700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 58601497-58602496 Panicum hallii HAL
PhHAL.1G452700 2.0kb upstream 2.0kb upstream 5278 true Chr01: 58602497-58607774 Panicum hallii HAL
PhHAL.1G452700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 58605775-58607774 Panicum hallii HAL
PhHAL.1G452700 2.0kb downstream 2.0kb downstream 5278 true Chr01: 58600497-58605774 Panicum hallii HAL
PhHAL.1G452700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 58600497-58602496 Panicum hallii HAL
PhHAL.1G452700 5.0kb upstream 5.0kb upstream 8278 true Chr01: 58602497-58610774 Panicum hallii HAL
PhHAL.1G452700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 58605775-58610774 Panicum hallii HAL
PhHAL.1G452700 5.0kb downstream 5.0kb downstream 8278 true Chr01: 58597497-58605774 Panicum hallii HAL
PhHAL.1G452700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 58597497-58602496 Panicum hallii HAL
PhHAL.1G452700 10.0kb upstream 10.0kb upstream 13278 true Chr01: 58602497-58615774 Panicum hallii HAL
PhHAL.1G452700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 58605775-58615774 Panicum hallii HAL
PhHAL.1G452700 10.0kb downstream 10.0kb downstream 13278 true Chr01: 58592497-58605774 Panicum hallii HAL
PhHAL.1G452700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 58592497-58602496 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197653 5267 Panicoideae View MSA
124576607 5269 Grass View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier