Gene : PhHAL.2G033900 P. hallii HAL v2.1

Defline:  (1 of 1) PTHR11451//PTHR11451:SF6 - TRNA SYNTHETASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  323
Name:  ? PhHAL.2G033900 Secondary Identifier:  ? PAC:40411208

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL TRNA-CHARGING-PWY Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.2G033900 0.5kb upstream 0.5kb upstream 5652 true Chr02: 2430485-2436136 Panicum hallii HAL
PhHAL.2G033900 0.5kb upstream 0.5kb upstream 500 false Chr02: 2430485-2430984 Panicum hallii HAL
PhHAL.2G033900 0.5kb downstream 0.5kb downstream 5652 true Chr02: 2430985-2436636 Panicum hallii HAL
PhHAL.2G033900 0.5kb downstream 0.5kb downstream 500 false Chr02: 2436137-2436636 Panicum hallii HAL
PhHAL.2G033900 1.0kb upstream 1.0kb upstream 6152 true Chr02: 2429985-2436136 Panicum hallii HAL
PhHAL.2G033900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2429985-2430984 Panicum hallii HAL
PhHAL.2G033900 1.0kb downstream 1.0kb downstream 6152 true Chr02: 2430985-2437136 Panicum hallii HAL
PhHAL.2G033900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2436137-2437136 Panicum hallii HAL
PhHAL.2G033900 2.0kb upstream 2.0kb upstream 7152 true Chr02: 2428985-2436136 Panicum hallii HAL
PhHAL.2G033900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2428985-2430984 Panicum hallii HAL
PhHAL.2G033900 2.0kb downstream 2.0kb downstream 7152 true Chr02: 2430985-2438136 Panicum hallii HAL
PhHAL.2G033900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2436137-2438136 Panicum hallii HAL
PhHAL.2G033900 5.0kb upstream 5.0kb upstream 10152 true Chr02: 2425985-2436136 Panicum hallii HAL
PhHAL.2G033900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2425985-2430984 Panicum hallii HAL
PhHAL.2G033900 5.0kb downstream 5.0kb downstream 10152 true Chr02: 2430985-2441136 Panicum hallii HAL
PhHAL.2G033900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2436137-2441136 Panicum hallii HAL
PhHAL.2G033900 10.0kb upstream 10.0kb upstream 15152 true Chr02: 2420985-2436136 Panicum hallii HAL
PhHAL.2G033900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2420985-2430984 Panicum hallii HAL
PhHAL.2G033900 10.0kb downstream 10.0kb downstream 15152 true Chr02: 2430985-2446136 Panicum hallii HAL
PhHAL.2G033900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2436137-2446136 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179040 5267 Panicoideae View MSA
124581859 5269 Grass View MSA
122044069 5273 Angiosperm View MSA
121345199 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier