Gene : Glyma.06G302400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10811//PTHR10811:SF19 - FRINGE-RELATED Genomic Order:  3024
Name:  ? Glyma.06G302400 Secondary Identifier:  ? PAC:30549990
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G302400 0.5kb upstream 0.5kb upstream 3326 true Chr06: 49172663-49175988 Glycine max
Glyma.06G302400 0.5kb upstream 0.5kb upstream 500 false Chr06: 49175489-49175988 Glycine max
Glyma.06G302400 0.5kb downstream 0.5kb downstream 3326 true Chr06: 49172163-49175488 Glycine max
Glyma.06G302400 0.5kb downstream 0.5kb downstream 500 false Chr06: 49172163-49172662 Glycine max
Glyma.06G302400 1.0kb upstream 1.0kb upstream 3826 true Chr06: 49172663-49176488 Glycine max
Glyma.06G302400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49175489-49176488 Glycine max
Glyma.06G302400 1.0kb downstream 1.0kb downstream 3826 true Chr06: 49171663-49175488 Glycine max
Glyma.06G302400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49171663-49172662 Glycine max
Glyma.06G302400 2.0kb upstream 2.0kb upstream 4826 true Chr06: 49172663-49177488 Glycine max
Glyma.06G302400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49175489-49177488 Glycine max
Glyma.06G302400 2.0kb downstream 2.0kb downstream 4826 true Chr06: 49170663-49175488 Glycine max
Glyma.06G302400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49170663-49172662 Glycine max
Glyma.06G302400 5.0kb upstream 5.0kb upstream 7826 true Chr06: 49172663-49180488 Glycine max
Glyma.06G302400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49175489-49180488 Glycine max
Glyma.06G302400 5.0kb downstream 5.0kb downstream 7826 true Chr06: 49167663-49175488 Glycine max
Glyma.06G302400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49167663-49172662 Glycine max
Glyma.06G302400 10.0kb upstream 10.0kb upstream 12826 true Chr06: 49172663-49185488 Glycine max
Glyma.06G302400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49175489-49185488 Glycine max
Glyma.06G302400 10.0kb downstream 10.0kb downstream 12826 true Chr06: 49162663-49175488 Glycine max
Glyma.06G302400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49162663-49172662 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302549 5265 Fabidae View MSA
124064758 5270 Rosid View MSA
123742167 5271 Pentapetalae View MSA
122792514 5272 Eudicot View MSA
122048571 5273 Angiosperm View MSA
121350591 5274 Embryophyte View MSA
123381812 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.426075 0.0 1.57398    
cufflinks 0.843177 0.0 2.97964    
cufflinks 2.12006 0.0 6.73216   High
cufflinks 1.22881 0.0 4.18947    
cufflinks 0.22073 0.0 0.840795 Low  
cufflinks 0.13437 0.0 0.52278 Low Low
cufflinks 0.135127 0.0 0.525577 Low Low
cufflinks 1.05561 0.0 3.65579    
cufflinks 0.298424 0.0 1.12116    
cufflinks 0.202        
cufflinks 2.442       High
cufflinks 1.064        
cufflinks 0.023     Low Low
cufflinks 0.071     Low  
cufflinks 0.125        
cufflinks 0.112        
cufflinks 0.699        
cufflinks 0.548        
cufflinks 0.712        
cufflinks 0.061     Low Low
cufflinks 1.212       High
cufflinks 0.072     Low  
cufflinks 0.151        
cufflinks 2.582       High
cufflinks 0.08     Low  
cufflinks 0.979        

0 Strain