Gene : Glyma.06G306700 G. max Wm82.a2.v1
Defline:  (1 of 3) 3.4.24.85 - S2P endopeptidase / Sterol-regulatory element-binding proteins intramembrane protease Genomic Order:  3067
Name:  ? Glyma.06G306700 Secondary Identifier:  ? PAC:30552772
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G306700 0.5kb upstream 0.5kb upstream 3755 true Chr06: 49550765-49554519 Glycine max
Glyma.06G306700 0.5kb upstream 0.5kb upstream 500 false Chr06: 49554020-49554519 Glycine max
Glyma.06G306700 0.5kb downstream 0.5kb downstream 3755 true Chr06: 49550265-49554019 Glycine max
Glyma.06G306700 0.5kb downstream 0.5kb downstream 500 false Chr06: 49550265-49550764 Glycine max
Glyma.06G306700 1.0kb upstream 1.0kb upstream 4255 true Chr06: 49550765-49555019 Glycine max
Glyma.06G306700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49554020-49555019 Glycine max
Glyma.06G306700 1.0kb downstream 1.0kb downstream 4255 true Chr06: 49549765-49554019 Glycine max
Glyma.06G306700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49549765-49550764 Glycine max
Glyma.06G306700 2.0kb upstream 2.0kb upstream 5255 true Chr06: 49550765-49556019 Glycine max
Glyma.06G306700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49554020-49556019 Glycine max
Glyma.06G306700 2.0kb downstream 2.0kb downstream 5255 true Chr06: 49548765-49554019 Glycine max
Glyma.06G306700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49548765-49550764 Glycine max
Glyma.06G306700 5.0kb upstream 5.0kb upstream 8255 true Chr06: 49550765-49559019 Glycine max
Glyma.06G306700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49554020-49559019 Glycine max
Glyma.06G306700 5.0kb downstream 5.0kb downstream 8255 true Chr06: 49545765-49554019 Glycine max
Glyma.06G306700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49545765-49550764 Glycine max
Glyma.06G306700 10.0kb upstream 10.0kb upstream 13255 true Chr06: 49550765-49564019 Glycine max
Glyma.06G306700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49554020-49564019 Glycine max
Glyma.06G306700 10.0kb downstream 10.0kb downstream 13255 true Chr06: 49540765-49554019 Glycine max
Glyma.06G306700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49540765-49550764 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301183 5265 Fabidae View MSA
124063019 5270 Rosid View MSA
123739273 5271 Pentapetalae View MSA
122788607 5272 Eudicot View MSA
122044779 5273 Angiosperm View MSA
121347975 5274 Embryophyte View MSA
123424345 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.3605 0.0 56.6848   High
cufflinks 6.45742 0.0 25.7326    
cufflinks 6.75556 0.0 26.0672    
cufflinks 4.89514 0.0 21.3505    
cufflinks 2.20447 0.0 7.87898    
cufflinks 2.00143 0.0 7.2541   Low
cufflinks 2.75446 0.0 9.15778    
cufflinks 3.91365 0.0 14.8264    
cufflinks 2.42541 0.0 8.2387    
cufflinks 1.225        
cufflinks 0.402        
cufflinks 1.496        
cufflinks 0.468        
cufflinks 0.451        
cufflinks 0.545        
cufflinks 3.288       High
cufflinks 0.251       Low
cufflinks 0.955        
cufflinks 1.767        
cufflinks 4.153       High
cufflinks 0.326       Low
cufflinks 4.156       High
cufflinks 3.491       High
cufflinks 0.609        
cufflinks 3.922       High
cufflinks 0.225       Low

0 Strain