Gene : Glyma.06G308500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23024//PTHR23024:SF189 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Genomic Order:  3085
Name:  ? Glyma.06G308500 Secondary Identifier:  ? PAC:30552103
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6303 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G308500 0.5kb upstream 0.5kb upstream 2351 true Chr06: 49715706-49718056 Glycine max
Glyma.06G308500 0.5kb upstream 0.5kb upstream 500 false Chr06: 49717557-49718056 Glycine max
Glyma.06G308500 0.5kb downstream 0.5kb downstream 2351 true Chr06: 49715206-49717556 Glycine max
Glyma.06G308500 0.5kb downstream 0.5kb downstream 500 false Chr06: 49715206-49715705 Glycine max
Glyma.06G308500 1.0kb upstream 1.0kb upstream 2851 true Chr06: 49715706-49718556 Glycine max
Glyma.06G308500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49717557-49718556 Glycine max
Glyma.06G308500 1.0kb downstream 1.0kb downstream 2851 true Chr06: 49714706-49717556 Glycine max
Glyma.06G308500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49714706-49715705 Glycine max
Glyma.06G308500 2.0kb upstream 2.0kb upstream 3851 true Chr06: 49715706-49719556 Glycine max
Glyma.06G308500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49717557-49719556 Glycine max
Glyma.06G308500 2.0kb downstream 2.0kb downstream 3851 true Chr06: 49713706-49717556 Glycine max
Glyma.06G308500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49713706-49715705 Glycine max
Glyma.06G308500 5.0kb upstream 5.0kb upstream 6851 true Chr06: 49715706-49722556 Glycine max
Glyma.06G308500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49717557-49722556 Glycine max
Glyma.06G308500 5.0kb downstream 5.0kb downstream 6851 true Chr06: 49710706-49717556 Glycine max
Glyma.06G308500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49710706-49715705 Glycine max
Glyma.06G308500 10.0kb upstream 10.0kb upstream 11851 true Chr06: 49715706-49727556 Glycine max
Glyma.06G308500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49717557-49727556 Glycine max
Glyma.06G308500 10.0kb downstream 10.0kb downstream 11851 true Chr06: 49705706-49717556 Glycine max
Glyma.06G308500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49705706-49715705 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299309 5265 Fabidae View MSA
124070947 5270 Rosid View MSA
123751656 5271 Pentapetalae View MSA
122793188 5272 Eudicot View MSA
122047300 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.7153 0.0 92.6453 High High
cufflinks 0.397607 0.0 1.98141   Low
cufflinks 0.428929 0.0 2.13828   Low
cufflinks 1.38643 0.0 5.82269    
cufflinks 4.67498 0.0 17.6556    
cufflinks 16.3491 0.0 56.5189   High
cufflinks 5.9868 0.0 21.0799    
cufflinks 0.2933 0.0 1.44447   Low
cufflinks 10.8334 0.0 38.9658    
cufflinks 0.156       Low
cufflinks 7.061     High High
cufflinks 0.327        
cufflinks 5.86        
cufflinks 0.123       Low
cufflinks 2.64        
cufflinks 0.602        
cufflinks 1.518        
cufflinks 0.105     Low Low
cufflinks 0.402        
cufflinks 0.62        
cufflinks 18.88     High High
cufflinks 0.875        
cufflinks 0.753        
cufflinks 10.072     High High
cufflinks 0.608        
cufflinks 10.347     High High

0 Strain