Gene : Glyma.07G027500 G. max Wm82.a2.v1
Defline:  (1 of 70) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  275
Name:  ? Glyma.07G027500 Secondary Identifier:  ? PAC:30495561
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G027500 0.5kb upstream 0.5kb upstream 2192 true Chr07: 2185000-2187191 Glycine max
Glyma.07G027500 0.5kb upstream 0.5kb upstream 500 false Chr07: 2185000-2185499 Glycine max
Glyma.07G027500 0.5kb downstream 0.5kb downstream 2192 true Chr07: 2185500-2187691 Glycine max
Glyma.07G027500 0.5kb downstream 0.5kb downstream 500 false Chr07: 2187192-2187691 Glycine max
Glyma.07G027500 1.0kb upstream 1.0kb upstream 2692 true Chr07: 2184500-2187191 Glycine max
Glyma.07G027500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2184500-2185499 Glycine max
Glyma.07G027500 1.0kb downstream 1.0kb downstream 2692 true Chr07: 2185500-2188191 Glycine max
Glyma.07G027500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2187192-2188191 Glycine max
Glyma.07G027500 2.0kb upstream 2.0kb upstream 3692 true Chr07: 2183500-2187191 Glycine max
Glyma.07G027500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2183500-2185499 Glycine max
Glyma.07G027500 2.0kb downstream 2.0kb downstream 3692 true Chr07: 2185500-2189191 Glycine max
Glyma.07G027500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2187192-2189191 Glycine max
Glyma.07G027500 5.0kb upstream 5.0kb upstream 6692 true Chr07: 2180500-2187191 Glycine max
Glyma.07G027500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2180500-2185499 Glycine max
Glyma.07G027500 5.0kb downstream 5.0kb downstream 6692 true Chr07: 2185500-2192191 Glycine max
Glyma.07G027500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2187192-2192191 Glycine max
Glyma.07G027500 10.0kb upstream 10.0kb upstream 11692 true Chr07: 2175500-2187191 Glycine max
Glyma.07G027500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2175500-2185499 Glycine max
Glyma.07G027500 10.0kb downstream 10.0kb downstream 11692 true Chr07: 2185500-2197191 Glycine max
Glyma.07G027500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2187192-2197191 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309994 5265 Fabidae View MSA
124063690 5270 Rosid View MSA
123747336 5271 Pentapetalae View MSA
122785819 5272 Eudicot View MSA
122047273 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0222148 0.0 0.0948867 Low Low
cufflinks 0.0352934 0.0 0.145604 Low  
cufflinks 0.184731 0.0 0.711799    
cufflinks 3.51765 0.0 10.6105    
cufflinks 11.3707 0.0 30.5933   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0555769 0.0 0.224201 Low  
cufflinks 6.71036 0.0 18.6716   High
cufflinks 0.29        
cufflinks 1.638        
cufflinks 0.064     Low Low
cufflinks 6.622       High
cufflinks 1.13        
cufflinks 0.379        
cufflinks 0.023     Low Low
cufflinks 10.224     High High
cufflinks 0.2        
cufflinks 1.107        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.649        
cufflinks 0.007     Low Low
cufflinks 0.117        
cufflinks 6.131     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.222       High

0 Strain