Gene : Glyma.07G028000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Genomic Order:  280
Name:  ? Glyma.07G028000 Secondary Identifier:  ? PAC:30492315
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G028000 0.5kb upstream 0.5kb upstream 7516 true Chr07: 2254767-2262282 Glycine max
Glyma.07G028000 0.5kb upstream 0.5kb upstream 500 false Chr07: 2254767-2255266 Glycine max
Glyma.07G028000 0.5kb downstream 0.5kb downstream 7516 true Chr07: 2255267-2262782 Glycine max
Glyma.07G028000 0.5kb downstream 0.5kb downstream 500 false Chr07: 2262283-2262782 Glycine max
Glyma.07G028000 1.0kb upstream 1.0kb upstream 8016 true Chr07: 2254267-2262282 Glycine max
Glyma.07G028000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2254267-2255266 Glycine max
Glyma.07G028000 1.0kb downstream 1.0kb downstream 8016 true Chr07: 2255267-2263282 Glycine max
Glyma.07G028000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2262283-2263282 Glycine max
Glyma.07G028000 2.0kb upstream 2.0kb upstream 9016 true Chr07: 2253267-2262282 Glycine max
Glyma.07G028000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2253267-2255266 Glycine max
Glyma.07G028000 2.0kb downstream 2.0kb downstream 9016 true Chr07: 2255267-2264282 Glycine max
Glyma.07G028000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2262283-2264282 Glycine max
Glyma.07G028000 5.0kb upstream 5.0kb upstream 12016 true Chr07: 2250267-2262282 Glycine max
Glyma.07G028000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2250267-2255266 Glycine max
Glyma.07G028000 5.0kb downstream 5.0kb downstream 12016 true Chr07: 2255267-2267282 Glycine max
Glyma.07G028000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2262283-2267282 Glycine max
Glyma.07G028000 10.0kb upstream 10.0kb upstream 17016 true Chr07: 2245267-2262282 Glycine max
Glyma.07G028000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2245267-2255266 Glycine max
Glyma.07G028000 10.0kb downstream 10.0kb downstream 17016 true Chr07: 2255267-2272282 Glycine max
Glyma.07G028000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2262283-2272282 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309385 5265 Fabidae View MSA
124063339 5270 Rosid View MSA
123747741 5271 Pentapetalae View MSA
122790823 5272 Eudicot View MSA
122049559 5273 Angiosperm View MSA
121350875 5274 Embryophyte View MSA
123381918 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.8726 0.0 86.0991 High  
cufflinks 25.8874 0.0 73.3265 High  
cufflinks 23.6489 0.0 66.5324 High Low
cufflinks 41.8171 0.0 126.803 High High
cufflinks 29.0416 0.0 83.3953 High  
cufflinks 30.0886 0.0 86.9335 High  
cufflinks 26.424 0.0 74.9034 High  
cufflinks 37.5246 0.0 111.832 High High
cufflinks 24.1356 0.0 67.8517 High Low
cufflinks 20.293     High  
cufflinks 15.914     High  
cufflinks 19.989     High  
cufflinks 24.079     High High
cufflinks 20.981     High  
cufflinks 11.199     High Low
cufflinks 14.006     High  
cufflinks 18.346     High  
cufflinks 20.234     High  
cufflinks 27.782     High High
cufflinks 9.282     High Low
cufflinks 20.491     High  
cufflinks 10.904     High Low
cufflinks 12.108     High  
cufflinks 22.704     High  
cufflinks 10.764     High Low
cufflinks 23.923     High High

0 Strain