Gene : Glyma.07G016300 G. max Wm82.a2.v1
Defline:  (1 of 67) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  163
Name:  ? Glyma.07G016300 Secondary Identifier:  ? PAC:30493454
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G016300 0.5kb upstream 0.5kb upstream 1398 true Chr07: 1323005-1324402 Glycine max
Glyma.07G016300 0.5kb upstream 0.5kb upstream 500 false Chr07: 1323903-1324402 Glycine max
Glyma.07G016300 0.5kb downstream 0.5kb downstream 1398 true Chr07: 1322505-1323902 Glycine max
Glyma.07G016300 0.5kb downstream 0.5kb downstream 500 false Chr07: 1322505-1323004 Glycine max
Glyma.07G016300 1.0kb upstream 1.0kb upstream 1898 true Chr07: 1323005-1324902 Glycine max
Glyma.07G016300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1323903-1324902 Glycine max
Glyma.07G016300 1.0kb downstream 1.0kb downstream 1898 true Chr07: 1322005-1323902 Glycine max
Glyma.07G016300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1322005-1323004 Glycine max
Glyma.07G016300 2.0kb upstream 2.0kb upstream 2898 true Chr07: 1323005-1325902 Glycine max
Glyma.07G016300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1323903-1325902 Glycine max
Glyma.07G016300 2.0kb downstream 2.0kb downstream 2898 true Chr07: 1321005-1323902 Glycine max
Glyma.07G016300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1321005-1323004 Glycine max
Glyma.07G016300 5.0kb upstream 5.0kb upstream 5898 true Chr07: 1323005-1328902 Glycine max
Glyma.07G016300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1323903-1328902 Glycine max
Glyma.07G016300 5.0kb downstream 5.0kb downstream 5898 true Chr07: 1318005-1323902 Glycine max
Glyma.07G016300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1318005-1323004 Glycine max
Glyma.07G016300 10.0kb upstream 10.0kb upstream 10898 true Chr07: 1323005-1333902 Glycine max
Glyma.07G016300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1323903-1333902 Glycine max
Glyma.07G016300 10.0kb downstream 10.0kb downstream 10898 true Chr07: 1313005-1323902 Glycine max
Glyma.07G016300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1313005-1323004 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298873 5265 Fabidae View MSA
124070746 5270 Rosid View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.741379 0.0 2.77662    
cufflinks 1.58089 0.0 5.68221    
cufflinks 0.462 0.0 1.77088   Low
cufflinks 0.629559 0.0 2.37625   Low
cufflinks 2.04061 0.0 7.16411    
cufflinks 3.39618 0.0 11.3891   High
cufflinks 0.868477 0.0 3.22235    
cufflinks 4.47554 0.0 14.3719   High
cufflinks 1.98928 0.0 7.01105    
cufflinks 6.553        
cufflinks 2.617        
cufflinks 1.452        
cufflinks 0.323        
cufflinks 0.041     Low Low
cufflinks 4.995        
cufflinks 0.442        
cufflinks 46.764     High High
cufflinks 1.847        
cufflinks 1.483        
cufflinks 0.385        
cufflinks 3.691        
cufflinks 0.427        
cufflinks 1.311        
cufflinks 2.374        
cufflinks 0.278        
cufflinks 9.512     High High

0 Strain