Gene : Glyma.07G019500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24326:SF272 - HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 Genomic Order:  195
Name:  ? Glyma.07G019500 Secondary Identifier:  ? PAC:30491675
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G019500 0.5kb upstream 0.5kb upstream 6257 true Chr07: 1545311-1551567 Glycine max
Glyma.07G019500 0.5kb upstream 0.5kb upstream 500 false Chr07: 1545311-1545810 Glycine max
Glyma.07G019500 0.5kb downstream 0.5kb downstream 6257 true Chr07: 1545811-1552067 Glycine max
Glyma.07G019500 0.5kb downstream 0.5kb downstream 500 false Chr07: 1551568-1552067 Glycine max
Glyma.07G019500 1.0kb upstream 1.0kb upstream 6757 true Chr07: 1544811-1551567 Glycine max
Glyma.07G019500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1544811-1545810 Glycine max
Glyma.07G019500 1.0kb downstream 1.0kb downstream 6757 true Chr07: 1545811-1552567 Glycine max
Glyma.07G019500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1551568-1552567 Glycine max
Glyma.07G019500 2.0kb upstream 2.0kb upstream 7757 true Chr07: 1543811-1551567 Glycine max
Glyma.07G019500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1543811-1545810 Glycine max
Glyma.07G019500 2.0kb downstream 2.0kb downstream 7757 true Chr07: 1545811-1553567 Glycine max
Glyma.07G019500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1551568-1553567 Glycine max
Glyma.07G019500 5.0kb upstream 5.0kb upstream 10757 true Chr07: 1540811-1551567 Glycine max
Glyma.07G019500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1540811-1545810 Glycine max
Glyma.07G019500 5.0kb downstream 5.0kb downstream 10757 true Chr07: 1545811-1556567 Glycine max
Glyma.07G019500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1551568-1556567 Glycine max
Glyma.07G019500 10.0kb upstream 10.0kb upstream 15757 true Chr07: 1535811-1551567 Glycine max
Glyma.07G019500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1535811-1545810 Glycine max
Glyma.07G019500 10.0kb downstream 10.0kb downstream 15757 true Chr07: 1545811-1561567 Glycine max
Glyma.07G019500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1551568-1561567 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255281 5265 Fabidae View MSA
123997072 5270 Rosid View MSA
123571426 5271 Pentapetalae View MSA
122606152 5272 Eudicot View MSA
122048483 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.741265 0.0 2.99979    
cufflinks 5.18733 0.0 18.998   High
cufflinks 1.41747 0.0 4.785    
cufflinks 1.80619 0.0 7.46366    
cufflinks 0.724192 0.0 2.9442    
cufflinks 0.515874 0.0 2.98515   Low
cufflinks 2.07786 0.0 6.28097    
cufflinks 2.58671 0.0 9.41265    
cufflinks 1.2169 0.0 4.40913    
cufflinks 0.831        
cufflinks 0.196       Low
cufflinks 0.94        
cufflinks 0.329        
cufflinks 0.217        
cufflinks 0.067       Low
cufflinks 1.489        
cufflinks 0.207        
cufflinks 1.382        
cufflinks 3.374       High
cufflinks 0.829        
cufflinks 0.521        
cufflinks 1.538        
cufflinks 3.493       High
cufflinks 0.251        
cufflinks 1.21        
cufflinks 0.291        

0 Strain