Gene : PhHAL.3G425200 P. hallii HAL v2.1

Defline:  (1 of 1) PTHR31209//PTHR31209:SF0 - FAMILY NOT NAMED // COFACTOR-INDEPENDENT PHOSPHOGLYCERATE MUTASE Genomic Order:  3666
Name:  ? PhHAL.3G425200 Secondary Identifier:  ? PAC:40405351

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL GLUCONEO-PWY Panicum hallii HAL pathologic  
PhalliiHAL PWY-1042 Panicum hallii HAL pathologic  
PhalliiHAL PWY-5464 Panicum hallii HAL pathologic  
PhalliiHAL PWY-5723 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.3G425200 0.5kb upstream 0.5kb upstream 3504 true Chr03: 53036161-53039664 Panicum hallii HAL
PhHAL.3G425200 0.5kb upstream 0.5kb upstream 500 false Chr03: 53039165-53039664 Panicum hallii HAL
PhHAL.3G425200 0.5kb downstream 0.5kb downstream 3504 true Chr03: 53035661-53039164 Panicum hallii HAL
PhHAL.3G425200 0.5kb downstream 0.5kb downstream 500 false Chr03: 53035661-53036160 Panicum hallii HAL
PhHAL.3G425200 1.0kb upstream 1.0kb upstream 4004 true Chr03: 53036161-53040164 Panicum hallii HAL
PhHAL.3G425200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 53039165-53040164 Panicum hallii HAL
PhHAL.3G425200 1.0kb downstream 1.0kb downstream 4004 true Chr03: 53035161-53039164 Panicum hallii HAL
PhHAL.3G425200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 53035161-53036160 Panicum hallii HAL
PhHAL.3G425200 2.0kb upstream 2.0kb upstream 5004 true Chr03: 53036161-53041164 Panicum hallii HAL
PhHAL.3G425200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 53039165-53041164 Panicum hallii HAL
PhHAL.3G425200 2.0kb downstream 2.0kb downstream 5004 true Chr03: 53034161-53039164 Panicum hallii HAL
PhHAL.3G425200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 53034161-53036160 Panicum hallii HAL
PhHAL.3G425200 5.0kb upstream 5.0kb upstream 8004 true Chr03: 53036161-53044164 Panicum hallii HAL
PhHAL.3G425200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 53039165-53044164 Panicum hallii HAL
PhHAL.3G425200 5.0kb downstream 5.0kb downstream 8004 true Chr03: 53031161-53039164 Panicum hallii HAL
PhHAL.3G425200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 53031161-53036160 Panicum hallii HAL
PhHAL.3G425200 10.0kb upstream 10.0kb upstream 13004 true Chr03: 53036161-53049164 Panicum hallii HAL
PhHAL.3G425200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 53039165-53049164 Panicum hallii HAL
PhHAL.3G425200 10.0kb downstream 10.0kb downstream 13004 true Chr03: 53026161-53039164 Panicum hallii HAL
PhHAL.3G425200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 53026161-53036160 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175652 5267 Panicoideae View MSA
124574027 5269 Grass View MSA
122046055 5273 Angiosperm View MSA
121343817 5274 Embryophyte View MSA
123428865 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier