Gene : Glyma.07G002700 G. max Wm82.a2.v1
Defline:  (1 of 6) PF02325 - YGGT family (YGGT) Genomic Order:  27
Name:  ? Glyma.07G002700 Secondary Identifier:  ? PAC:30492385
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G002700 0.5kb upstream 0.5kb upstream 1893 true Chr07: 217268-219160 Glycine max
Glyma.07G002700 0.5kb upstream 0.5kb upstream 500 false Chr07: 218661-219160 Glycine max
Glyma.07G002700 0.5kb downstream 0.5kb downstream 1893 true Chr07: 216768-218660 Glycine max
Glyma.07G002700 0.5kb downstream 0.5kb downstream 500 false Chr07: 216768-217267 Glycine max
Glyma.07G002700 1.0kb upstream 1.0kb upstream 2393 true Chr07: 217268-219660 Glycine max
Glyma.07G002700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 218661-219660 Glycine max
Glyma.07G002700 1.0kb downstream 1.0kb downstream 2393 true Chr07: 216268-218660 Glycine max
Glyma.07G002700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 216268-217267 Glycine max
Glyma.07G002700 2.0kb upstream 2.0kb upstream 3393 true Chr07: 217268-220660 Glycine max
Glyma.07G002700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 218661-220660 Glycine max
Glyma.07G002700 2.0kb downstream 2.0kb downstream 3393 true Chr07: 215268-218660 Glycine max
Glyma.07G002700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 215268-217267 Glycine max
Glyma.07G002700 5.0kb upstream 5.0kb upstream 6393 true Chr07: 217268-223660 Glycine max
Glyma.07G002700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 218661-223660 Glycine max
Glyma.07G002700 5.0kb downstream 5.0kb downstream 6393 true Chr07: 212268-218660 Glycine max
Glyma.07G002700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 212268-217267 Glycine max
Glyma.07G002700 10.0kb upstream 10.0kb upstream 11393 true Chr07: 217268-228660 Glycine max
Glyma.07G002700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 218661-228660 Glycine max
Glyma.07G002700 10.0kb downstream 10.0kb downstream 11393 true Chr07: 207268-218660 Glycine max
Glyma.07G002700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 207268-217267 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309420 5265 Fabidae View MSA
124073194 5270 Rosid View MSA
123747708 5271 Pentapetalae View MSA
122788477 5272 Eudicot View MSA
122044602 5273 Angiosperm View MSA
121348481 5274 Embryophyte View MSA
123428591 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.2977 0.0 80.8369 High High
cufflinks 14.9249 0.0 40.9407    
cufflinks 14.4146 0.0 39.7004    
cufflinks 10.3833 0.0 29.4538    
cufflinks 9.49916 0.0 27.1414    
cufflinks 8.01475 0.0 23.388   Low
cufflinks 22.159 0.0 59.4534 High High
cufflinks 11.3796 0.0 31.955    
cufflinks 7.34714 0.0 21.7029   Low
cufflinks 4.578        
cufflinks 1.725       Low
cufflinks 6.954        
cufflinks 2.79        
cufflinks 3.278        
cufflinks 2.091        
cufflinks 7.749     High High
cufflinks 1.788       Low
cufflinks 5.433        
cufflinks 8.1     High High
cufflinks 7.646     High High
cufflinks 1.8       Low
cufflinks 7.38     High  
cufflinks 7.722     High High
cufflinks 2.294        
cufflinks 6.444        
cufflinks 1.678       Low

0 Strain