Gene : Glyma.07G003400 G. max Wm82.a2.v1
Defline:  (1 of 5) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase Genomic Order:  34
Name:  ? Glyma.07G003400 Secondary Identifier:  ? PAC:30494775
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax SER-GLYSYN-PWY Glycine max pathologic  
Gmax SERSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G003400 0.5kb upstream 0.5kb upstream 3128 true Chr07: 263041-266168 Glycine max
Glyma.07G003400 0.5kb upstream 0.5kb upstream 500 false Chr07: 263041-263540 Glycine max
Glyma.07G003400 0.5kb downstream 0.5kb downstream 3128 true Chr07: 263541-266668 Glycine max
Glyma.07G003400 0.5kb downstream 0.5kb downstream 500 false Chr07: 266169-266668 Glycine max
Glyma.07G003400 1.0kb upstream 1.0kb upstream 3628 true Chr07: 262541-266168 Glycine max
Glyma.07G003400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 262541-263540 Glycine max
Glyma.07G003400 1.0kb downstream 1.0kb downstream 3628 true Chr07: 263541-267168 Glycine max
Glyma.07G003400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 266169-267168 Glycine max
Glyma.07G003400 2.0kb upstream 2.0kb upstream 4628 true Chr07: 261541-266168 Glycine max
Glyma.07G003400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 261541-263540 Glycine max
Glyma.07G003400 2.0kb downstream 2.0kb downstream 4628 true Chr07: 263541-268168 Glycine max
Glyma.07G003400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 266169-268168 Glycine max
Glyma.07G003400 5.0kb upstream 5.0kb upstream 7628 true Chr07: 258541-266168 Glycine max
Glyma.07G003400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 258541-263540 Glycine max
Glyma.07G003400 5.0kb downstream 5.0kb downstream 7628 true Chr07: 263541-271168 Glycine max
Glyma.07G003400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 266169-271168 Glycine max
Glyma.07G003400 10.0kb upstream 10.0kb upstream 12628 true Chr07: 253541-266168 Glycine max
Glyma.07G003400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 253541-263540 Glycine max
Glyma.07G003400 10.0kb downstream 10.0kb downstream 12628 true Chr07: 263541-276168 Glycine max
Glyma.07G003400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 266169-276168 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306930 5265 Fabidae View MSA
124069252 5270 Rosid View MSA
123744106 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.6779 0.0 31.1551    
cufflinks 38.365 0.0 110.227 High  
cufflinks 13.2465 0.0 35.361    
cufflinks 62.115 0.0 192.452 High  
cufflinks 44.4737 0.0 131.068 High  
cufflinks 15.3671 0.0 41.1503    
cufflinks 1.48371 0.0 4.78289   Low
cufflinks 65.177 0.0 204.02 High  
cufflinks 37.8039 0.0 108.705 High  
cufflinks 68.582     High High
cufflinks 0.935       Low
cufflinks 22.371     High  
cufflinks 39.628     High  
cufflinks 53.789     High High
cufflinks 1.388       Low
cufflinks 19.491     High  
cufflinks 17.05     High  
cufflinks 43.838     High  
cufflinks 58.098     High High
cufflinks 13.405     High  
cufflinks 1.859       Low
cufflinks 15.44     High  
cufflinks 20.632     High  
cufflinks 0.989       Low
cufflinks 13.889     High  
cufflinks 5.431        

0 Strain