Gene : PhHAL.3G471800 P. hallii HAL v2.1

Defline:  (1 of 14) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  4113
Name:  ? PhHAL.3G471800 Secondary Identifier:  ? PAC:40406507

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.3G471800 0.5kb upstream 0.5kb upstream 6870 true Chr03: 56683329-56690198 Panicum hallii HAL
PhHAL.3G471800 0.5kb upstream 0.5kb upstream 500 false Chr03: 56689699-56690198 Panicum hallii HAL
PhHAL.3G471800 0.5kb downstream 0.5kb downstream 6870 true Chr03: 56682829-56689698 Panicum hallii HAL
PhHAL.3G471800 0.5kb downstream 0.5kb downstream 500 false Chr03: 56682829-56683328 Panicum hallii HAL
PhHAL.3G471800 1.0kb upstream 1.0kb upstream 7370 true Chr03: 56683329-56690698 Panicum hallii HAL
PhHAL.3G471800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 56689699-56690698 Panicum hallii HAL
PhHAL.3G471800 1.0kb downstream 1.0kb downstream 7370 true Chr03: 56682329-56689698 Panicum hallii HAL
PhHAL.3G471800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 56682329-56683328 Panicum hallii HAL
PhHAL.3G471800 2.0kb upstream 2.0kb upstream 8370 true Chr03: 56683329-56691698 Panicum hallii HAL
PhHAL.3G471800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 56689699-56691698 Panicum hallii HAL
PhHAL.3G471800 2.0kb downstream 2.0kb downstream 8370 true Chr03: 56681329-56689698 Panicum hallii HAL
PhHAL.3G471800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 56681329-56683328 Panicum hallii HAL
PhHAL.3G471800 5.0kb upstream 5.0kb upstream 11370 true Chr03: 56683329-56694698 Panicum hallii HAL
PhHAL.3G471800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 56689699-56694698 Panicum hallii HAL
PhHAL.3G471800 5.0kb downstream 5.0kb downstream 11370 true Chr03: 56678329-56689698 Panicum hallii HAL
PhHAL.3G471800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 56678329-56683328 Panicum hallii HAL
PhHAL.3G471800 10.0kb upstream 10.0kb upstream 16370 true Chr03: 56683329-56699698 Panicum hallii HAL
PhHAL.3G471800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 56689699-56699698 Panicum hallii HAL
PhHAL.3G471800 10.0kb downstream 10.0kb downstream 16370 true Chr03: 56673329-56689698 Panicum hallii HAL
PhHAL.3G471800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 56673329-56683328 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176881 5267 Panicoideae View MSA
124573945 5269 Grass View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier