Gene : Glyma.07G004100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10635 - COATOMER SUBUNIT BETA Genomic Order:  41
Name:  ? Glyma.07G004100 Secondary Identifier:  ? PAC:30495505
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G004100 0.5kb upstream 0.5kb upstream 6273 true Chr07: 299556-305828 Glycine max
Glyma.07G004100 0.5kb upstream 0.5kb upstream 500 false Chr07: 305329-305828 Glycine max
Glyma.07G004100 0.5kb downstream 0.5kb downstream 6273 true Chr07: 299056-305328 Glycine max
Glyma.07G004100 0.5kb downstream 0.5kb downstream 500 false Chr07: 299056-299555 Glycine max
Glyma.07G004100 1.0kb upstream 1.0kb upstream 6773 true Chr07: 299556-306328 Glycine max
Glyma.07G004100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 305329-306328 Glycine max
Glyma.07G004100 1.0kb downstream 1.0kb downstream 6773 true Chr07: 298556-305328 Glycine max
Glyma.07G004100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 298556-299555 Glycine max
Glyma.07G004100 2.0kb upstream 2.0kb upstream 7773 true Chr07: 299556-307328 Glycine max
Glyma.07G004100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 305329-307328 Glycine max
Glyma.07G004100 2.0kb downstream 2.0kb downstream 7773 true Chr07: 297556-305328 Glycine max
Glyma.07G004100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 297556-299555 Glycine max
Glyma.07G004100 5.0kb upstream 5.0kb upstream 10773 true Chr07: 299556-310328 Glycine max
Glyma.07G004100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 305329-310328 Glycine max
Glyma.07G004100 5.0kb downstream 5.0kb downstream 10773 true Chr07: 294556-305328 Glycine max
Glyma.07G004100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 294556-299555 Glycine max
Glyma.07G004100 10.0kb upstream 10.0kb upstream 15773 true Chr07: 299556-315328 Glycine max
Glyma.07G004100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 305329-315328 Glycine max
Glyma.07G004100 10.0kb downstream 10.0kb downstream 15773 true Chr07: 289556-305328 Glycine max
Glyma.07G004100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 289556-299555 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304906 5265 Fabidae View MSA
124065848 5270 Rosid View MSA
123753306 5271 Pentapetalae View MSA
122786430 5272 Eudicot View MSA
122042761 5273 Angiosperm View MSA
121349465 5274 Embryophyte View MSA
123426432 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.5294 0.0 78.2161 High  
cufflinks 28.3104 0.0 80.6552 High  
cufflinks 15.4679 0.0 41.8353   Low
cufflinks 37.7305 0.0 111.838 High  
cufflinks 48.1869 0.0 148.732 High High
cufflinks 28.2716 0.0 80.6634 High  
cufflinks 29.866 0.0 85.6843 High  
cufflinks 39.6043 0.0 118.45 High  
cufflinks 24.5174 0.0 68.8149 High  
cufflinks 29.583     High High
cufflinks 7.458     High Low
cufflinks 11.98     High  
cufflinks 31.697     High High
cufflinks 41.623     High High
cufflinks 7.655     High Low
cufflinks 21.071     High  
cufflinks 12.632     High  
cufflinks 18.807     High  
cufflinks 23.551     High  
cufflinks 18.103     High  
cufflinks 12.268     High  
cufflinks 18.838     High  
cufflinks 20.493     High  
cufflinks 10.719     High  
cufflinks 18.501     High  
cufflinks 13.9     High  

0 Strain