Gene : PhHAL.2G388800 P. hallii HAL v2.1

Defline:  (1 of 1) PTHR33399:SF3 - OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC-RELATED Genomic Order:  3293
Name:  ? PhHAL.2G388800 Secondary Identifier:  ? PAC:40410366

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.2G388800 0.5kb upstream 0.5kb upstream 2957 true Chr02: 52020378-52023334 Panicum hallii HAL
PhHAL.2G388800 0.5kb upstream 0.5kb upstream 500 false Chr02: 52020378-52020877 Panicum hallii HAL
PhHAL.2G388800 0.5kb downstream 0.5kb downstream 2957 true Chr02: 52020878-52023834 Panicum hallii HAL
PhHAL.2G388800 0.5kb downstream 0.5kb downstream 500 false Chr02: 52023335-52023834 Panicum hallii HAL
PhHAL.2G388800 1.0kb upstream 1.0kb upstream 3457 true Chr02: 52019878-52023334 Panicum hallii HAL
PhHAL.2G388800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 52019878-52020877 Panicum hallii HAL
PhHAL.2G388800 1.0kb downstream 1.0kb downstream 3457 true Chr02: 52020878-52024334 Panicum hallii HAL
PhHAL.2G388800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 52023335-52024334 Panicum hallii HAL
PhHAL.2G388800 2.0kb upstream 2.0kb upstream 4457 true Chr02: 52018878-52023334 Panicum hallii HAL
PhHAL.2G388800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 52018878-52020877 Panicum hallii HAL
PhHAL.2G388800 2.0kb downstream 2.0kb downstream 4457 true Chr02: 52020878-52025334 Panicum hallii HAL
PhHAL.2G388800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 52023335-52025334 Panicum hallii HAL
PhHAL.2G388800 5.0kb upstream 5.0kb upstream 7457 true Chr02: 52015878-52023334 Panicum hallii HAL
PhHAL.2G388800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 52015878-52020877 Panicum hallii HAL
PhHAL.2G388800 5.0kb downstream 5.0kb downstream 7457 true Chr02: 52020878-52028334 Panicum hallii HAL
PhHAL.2G388800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 52023335-52028334 Panicum hallii HAL
PhHAL.2G388800 10.0kb upstream 10.0kb upstream 12457 true Chr02: 52010878-52023334 Panicum hallii HAL
PhHAL.2G388800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 52010878-52020877 Panicum hallii HAL
PhHAL.2G388800 10.0kb downstream 10.0kb downstream 12457 true Chr02: 52020878-52033334 Panicum hallii HAL
PhHAL.2G388800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 52023335-52033334 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175316 5267 Panicoideae View MSA
124582476 5269 Grass View MSA
122043772 5273 Angiosperm View MSA
121344186 5274 Embryophyte View MSA
123427004 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier