Gene : Glyma.07G006400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12952 - SYS1 Genomic Order:  64
Name:  ? Glyma.07G006400 Secondary Identifier:  ? PAC:30493749
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G006400 0.5kb upstream 0.5kb upstream 4164 true Chr07: 456984-461147 Glycine max
Glyma.07G006400 0.5kb upstream 0.5kb upstream 500 false Chr07: 456984-457483 Glycine max
Glyma.07G006400 0.5kb downstream 0.5kb downstream 4164 true Chr07: 457484-461647 Glycine max
Glyma.07G006400 0.5kb downstream 0.5kb downstream 500 false Chr07: 461148-461647 Glycine max
Glyma.07G006400 1.0kb upstream 1.0kb upstream 4664 true Chr07: 456484-461147 Glycine max
Glyma.07G006400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 456484-457483 Glycine max
Glyma.07G006400 1.0kb downstream 1.0kb downstream 4664 true Chr07: 457484-462147 Glycine max
Glyma.07G006400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 461148-462147 Glycine max
Glyma.07G006400 2.0kb upstream 2.0kb upstream 5664 true Chr07: 455484-461147 Glycine max
Glyma.07G006400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 455484-457483 Glycine max
Glyma.07G006400 2.0kb downstream 2.0kb downstream 5664 true Chr07: 457484-463147 Glycine max
Glyma.07G006400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 461148-463147 Glycine max
Glyma.07G006400 5.0kb upstream 5.0kb upstream 8664 true Chr07: 452484-461147 Glycine max
Glyma.07G006400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 452484-457483 Glycine max
Glyma.07G006400 5.0kb downstream 5.0kb downstream 8664 true Chr07: 457484-466147 Glycine max
Glyma.07G006400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 461148-466147 Glycine max
Glyma.07G006400 10.0kb upstream 10.0kb upstream 13664 true Chr07: 447484-461147 Glycine max
Glyma.07G006400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 447484-457483 Glycine max
Glyma.07G006400 10.0kb downstream 10.0kb downstream 13664 true Chr07: 457484-471147 Glycine max
Glyma.07G006400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 461148-471147 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029063 5273 Angiosperm View MSA
122308545 5265 Fabidae View MSA
124068023 5270 Rosid View MSA
123738308 5271 Pentapetalae View MSA
122789569 5272 Eudicot View MSA
121345746 5274 Embryophyte View MSA
123428394 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5195 0.0 70.8842    
cufflinks 10.1498 0.0 42.9056   Low
cufflinks 12.0102 0.0 52.6573    
cufflinks 14.0871 0.0 68.6729    
cufflinks 13.4943 0.0 54.1198    
cufflinks 19.3739 0.0 74.267   High
cufflinks 12.6583 0.0 66.5365    
cufflinks 23.0495 0.0 86.3757 High High
cufflinks 10.0667 0.0 46.9966   Low
cufflinks 0.997       High
cufflinks 0.276       Low
cufflinks 0.701        
cufflinks 0.901        
cufflinks 1.027       High
cufflinks 0.191       Low
cufflinks 0.681        
cufflinks 0.375        
cufflinks 0.921        
cufflinks 0.703        
cufflinks 0.689        
cufflinks 0.296       Low
cufflinks 0.772        
cufflinks 0.629        
cufflinks 0.375        
cufflinks 0.665        
cufflinks 0.448        

0 Strain