Gene : Glyma.07G006800 G. max Wm82.a2.v1
Defline:  (1 of 35) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  68
Name:  ? Glyma.07G006800 Secondary Identifier:  ? PAC:30493079
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5406 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G006800 0.5kb upstream 0.5kb upstream 1450 true Chr07: 495717-497166 Glycine max
Glyma.07G006800 0.5kb upstream 0.5kb upstream 500 false Chr07: 495717-496216 Glycine max
Glyma.07G006800 0.5kb downstream 0.5kb downstream 1450 true Chr07: 496217-497666 Glycine max
Glyma.07G006800 0.5kb downstream 0.5kb downstream 500 false Chr07: 497167-497666 Glycine max
Glyma.07G006800 1.0kb upstream 1.0kb upstream 1950 true Chr07: 495217-497166 Glycine max
Glyma.07G006800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 495217-496216 Glycine max
Glyma.07G006800 1.0kb downstream 1.0kb downstream 1950 true Chr07: 496217-498166 Glycine max
Glyma.07G006800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 497167-498166 Glycine max
Glyma.07G006800 2.0kb upstream 2.0kb upstream 2950 true Chr07: 494217-497166 Glycine max
Glyma.07G006800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 494217-496216 Glycine max
Glyma.07G006800 2.0kb downstream 2.0kb downstream 2950 true Chr07: 496217-499166 Glycine max
Glyma.07G006800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 497167-499166 Glycine max
Glyma.07G006800 5.0kb upstream 5.0kb upstream 5950 true Chr07: 491217-497166 Glycine max
Glyma.07G006800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 491217-496216 Glycine max
Glyma.07G006800 5.0kb downstream 5.0kb downstream 5950 true Chr07: 496217-502166 Glycine max
Glyma.07G006800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 497167-502166 Glycine max
Glyma.07G006800 10.0kb upstream 10.0kb upstream 10950 true Chr07: 486217-497166 Glycine max
Glyma.07G006800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 486217-496216 Glycine max
Glyma.07G006800 10.0kb downstream 10.0kb downstream 10950 true Chr07: 496217-507166 Glycine max
Glyma.07G006800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 497167-507166 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250461 5265 Fabidae View MSA
124038744 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.112441 0.0 0.458064 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.154649 0.0 0.620334 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.5347 0.0 20.4264    
cufflinks 11.0958 0.0 32.2029    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 32.9702 0.0 88.1573 High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 391.712     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 29.34     High Low
cufflinks 18.608     High Low
cufflinks 170.804     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 92.122     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 271.356     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 447.281     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 472.463     High  

0 Strain