Gene : PhHAL.3G095100 P. hallii HAL v2.1

Defline:  (1 of 1) PTHR11254//PTHR11254:SF327 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED Genomic Order:  932
Name:  ? PhHAL.3G095100 Secondary Identifier:  ? PAC:40405804

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-7511 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.3G095100 0.5kb upstream 0.5kb upstream 7781 true Chr03: 5674597-5682377 Panicum hallii HAL
PhHAL.3G095100 0.5kb upstream 0.5kb upstream 500 false Chr03: 5674597-5675096 Panicum hallii HAL
PhHAL.3G095100 0.5kb downstream 0.5kb downstream 7781 true Chr03: 5675097-5682877 Panicum hallii HAL
PhHAL.3G095100 0.5kb downstream 0.5kb downstream 500 false Chr03: 5682378-5682877 Panicum hallii HAL
PhHAL.3G095100 1.0kb upstream 1.0kb upstream 8281 true Chr03: 5674097-5682377 Panicum hallii HAL
PhHAL.3G095100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 5674097-5675096 Panicum hallii HAL
PhHAL.3G095100 1.0kb downstream 1.0kb downstream 8281 true Chr03: 5675097-5683377 Panicum hallii HAL
PhHAL.3G095100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 5682378-5683377 Panicum hallii HAL
PhHAL.3G095100 2.0kb upstream 2.0kb upstream 9281 true Chr03: 5673097-5682377 Panicum hallii HAL
PhHAL.3G095100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 5673097-5675096 Panicum hallii HAL
PhHAL.3G095100 2.0kb downstream 2.0kb downstream 9281 true Chr03: 5675097-5684377 Panicum hallii HAL
PhHAL.3G095100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 5682378-5684377 Panicum hallii HAL
PhHAL.3G095100 5.0kb upstream 5.0kb upstream 12281 true Chr03: 5670097-5682377 Panicum hallii HAL
PhHAL.3G095100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 5670097-5675096 Panicum hallii HAL
PhHAL.3G095100 5.0kb downstream 5.0kb downstream 12281 true Chr03: 5675097-5687377 Panicum hallii HAL
PhHAL.3G095100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 5682378-5687377 Panicum hallii HAL
PhHAL.3G095100 10.0kb upstream 10.0kb upstream 17281 true Chr03: 5665097-5682377 Panicum hallii HAL
PhHAL.3G095100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 5665097-5675096 Panicum hallii HAL
PhHAL.3G095100 10.0kb downstream 10.0kb downstream 17281 true Chr03: 5675097-5692377 Panicum hallii HAL
PhHAL.3G095100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 5682378-5692377 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188896 5267 Panicoideae View MSA
124574381 5269 Grass View MSA
122044351 5273 Angiosperm View MSA
121310283 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier