Gene : Glyma.07G048200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31140:SF4 - B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA1-RELATED Genomic Order:  482
Name:  ? Glyma.07G048200 Secondary Identifier:  ? PAC:30491969
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G048200 0.5kb upstream 0.5kb upstream 3150 true Chr07: 4061864-4065013 Glycine max
Glyma.07G048200 0.5kb upstream 0.5kb upstream 500 false Chr07: 4064514-4065013 Glycine max
Glyma.07G048200 0.5kb downstream 0.5kb downstream 3150 true Chr07: 4061364-4064513 Glycine max
Glyma.07G048200 0.5kb downstream 0.5kb downstream 500 false Chr07: 4061364-4061863 Glycine max
Glyma.07G048200 1.0kb upstream 1.0kb upstream 3650 true Chr07: 4061864-4065513 Glycine max
Glyma.07G048200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4064514-4065513 Glycine max
Glyma.07G048200 1.0kb downstream 1.0kb downstream 3650 true Chr07: 4060864-4064513 Glycine max
Glyma.07G048200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4060864-4061863 Glycine max
Glyma.07G048200 2.0kb upstream 2.0kb upstream 4650 true Chr07: 4061864-4066513 Glycine max
Glyma.07G048200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4064514-4066513 Glycine max
Glyma.07G048200 2.0kb downstream 2.0kb downstream 4650 true Chr07: 4059864-4064513 Glycine max
Glyma.07G048200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4059864-4061863 Glycine max
Glyma.07G048200 5.0kb upstream 5.0kb upstream 7650 true Chr07: 4061864-4069513 Glycine max
Glyma.07G048200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4064514-4069513 Glycine max
Glyma.07G048200 5.0kb downstream 5.0kb downstream 7650 true Chr07: 4056864-4064513 Glycine max
Glyma.07G048200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4056864-4061863 Glycine max
Glyma.07G048200 10.0kb upstream 10.0kb upstream 12650 true Chr07: 4061864-4074513 Glycine max
Glyma.07G048200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4064514-4074513 Glycine max
Glyma.07G048200 10.0kb downstream 10.0kb downstream 12650 true Chr07: 4051864-4064513 Glycine max
Glyma.07G048200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4051864-4061863 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313330 5265 Fabidae View MSA
124069436 5270 Rosid View MSA
123743929 5271 Pentapetalae View MSA
122797539 5272 Eudicot View MSA
122049835 5273 Angiosperm View MSA
121349423 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.33619 0.0 29.2606    
cufflinks 9.99364 0.0 34.3159   High
cufflinks 8.87217 0.0 34.2614   High
cufflinks 1.03192 0.0 5.4727    
cufflinks 0.619045 0.0 3.64152   Low
cufflinks 1.64983 0.0 7.78414    
cufflinks 2.81581 0.0 11.4436    
cufflinks 0.57415 0.0 3.42503   Low
cufflinks 3.00978 0.0 11.8019    
cufflinks 0.166        
cufflinks 0.068       Low
cufflinks 3.303        
cufflinks 0.664        
cufflinks 0.086       Low
cufflinks 0.747        
cufflinks 3.933        
cufflinks 0.32        
cufflinks 4.033        
cufflinks 5.833       High
cufflinks 2.934        
cufflinks 0.062     Low Low
cufflinks 3.996        
cufflinks 6.496       High
cufflinks 0.17        
cufflinks 2.771        
cufflinks 0.132       Low

0 Strain