Gene : Glyma.07G048700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11746//PTHR11746:SF103 - O-METHYLTRANSFERASE Genomic Order:  487
Name:  ? Glyma.07G048700 Secondary Identifier:  ? PAC:30491731
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1121 Glycine max pathologic  
Gmax PWY-2181 Glycine max pathologic  
Gmax PWY-361 Glycine max pathologic  
Gmax PWY-7186 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G048700 0.5kb upstream 0.5kb upstream 2716 true Chr07: 4146098-4148813 Glycine max
Glyma.07G048700 0.5kb upstream 0.5kb upstream 500 false Chr07: 4146098-4146597 Glycine max
Glyma.07G048700 0.5kb downstream 0.5kb downstream 2716 true Chr07: 4146598-4149313 Glycine max
Glyma.07G048700 0.5kb downstream 0.5kb downstream 500 false Chr07: 4148814-4149313 Glycine max
Glyma.07G048700 1.0kb upstream 1.0kb upstream 3216 true Chr07: 4145598-4148813 Glycine max
Glyma.07G048700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4145598-4146597 Glycine max
Glyma.07G048700 1.0kb downstream 1.0kb downstream 3216 true Chr07: 4146598-4149813 Glycine max
Glyma.07G048700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4148814-4149813 Glycine max
Glyma.07G048700 2.0kb upstream 2.0kb upstream 4216 true Chr07: 4144598-4148813 Glycine max
Glyma.07G048700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4144598-4146597 Glycine max
Glyma.07G048700 2.0kb downstream 2.0kb downstream 4216 true Chr07: 4146598-4150813 Glycine max
Glyma.07G048700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4148814-4150813 Glycine max
Glyma.07G048700 5.0kb upstream 5.0kb upstream 7216 true Chr07: 4141598-4148813 Glycine max
Glyma.07G048700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4141598-4146597 Glycine max
Glyma.07G048700 5.0kb downstream 5.0kb downstream 7216 true Chr07: 4146598-4153813 Glycine max
Glyma.07G048700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4148814-4153813 Glycine max
Glyma.07G048700 10.0kb upstream 10.0kb upstream 12216 true Chr07: 4136598-4148813 Glycine max
Glyma.07G048700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4136598-4146597 Glycine max
Glyma.07G048700 10.0kb downstream 10.0kb downstream 12216 true Chr07: 4146598-4158813 Glycine max
Glyma.07G048700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4148814-4158813 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029927 5273 Angiosperm View MSA
122315963 5265 Fabidae View MSA
124075254 5270 Rosid View MSA
123753803 5271 Pentapetalae View MSA
122775246 5272 Eudicot View MSA
123429068 5275 Viridiplantae View MSA
121350689 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01391 0.0 3.7361    
cufflinks 0.544483 0.0 2.06549    
cufflinks 0.422821 0.0 1.62071    
cufflinks 0.163658 0.0 0.651184 Low Low
cufflinks 0.925061 0.0 3.42228    
cufflinks 0.0871496 0.0 0.356314 Low Low
cufflinks 0.361 0.0 1.39322    
cufflinks 0.676564 0.0 2.53867    
cufflinks 0.988939 0.0 3.64432    
cufflinks 1.196        
cufflinks 0.247       Low
cufflinks 1.276        
cufflinks 2.536       High
cufflinks 3.03       High
cufflinks 2.015        
cufflinks 1.318        
cufflinks 0.321       Low
cufflinks 1.0        
cufflinks 1.283        
cufflinks 1.111        
cufflinks 0.447       Low
cufflinks 1.034        
cufflinks 1.844        
cufflinks 0.34       Low
cufflinks 1.285        
cufflinks 0.403       Low

0 Strain