Gene : Glyma.07G048900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11746//PTHR11746:SF103 - O-METHYLTRANSFERASE Genomic Order:  489
Name:  ? Glyma.07G048900 Secondary Identifier:  ? PAC:30491524
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G048900 0.5kb upstream 0.5kb upstream 4466 true Chr07: 4156169-4160634 Glycine max
Glyma.07G048900 0.5kb upstream 0.5kb upstream 500 false Chr07: 4156169-4156668 Glycine max
Glyma.07G048900 0.5kb downstream 0.5kb downstream 4466 true Chr07: 4156669-4161134 Glycine max
Glyma.07G048900 0.5kb downstream 0.5kb downstream 500 false Chr07: 4160635-4161134 Glycine max
Glyma.07G048900 1.0kb upstream 1.0kb upstream 4966 true Chr07: 4155669-4160634 Glycine max
Glyma.07G048900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4155669-4156668 Glycine max
Glyma.07G048900 1.0kb downstream 1.0kb downstream 4966 true Chr07: 4156669-4161634 Glycine max
Glyma.07G048900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4160635-4161634 Glycine max
Glyma.07G048900 2.0kb upstream 2.0kb upstream 5966 true Chr07: 4154669-4160634 Glycine max
Glyma.07G048900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4154669-4156668 Glycine max
Glyma.07G048900 2.0kb downstream 2.0kb downstream 5966 true Chr07: 4156669-4162634 Glycine max
Glyma.07G048900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4160635-4162634 Glycine max
Glyma.07G048900 5.0kb upstream 5.0kb upstream 8966 true Chr07: 4151669-4160634 Glycine max
Glyma.07G048900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4151669-4156668 Glycine max
Glyma.07G048900 5.0kb downstream 5.0kb downstream 8966 true Chr07: 4156669-4165634 Glycine max
Glyma.07G048900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4160635-4165634 Glycine max
Glyma.07G048900 10.0kb upstream 10.0kb upstream 13966 true Chr07: 4146669-4160634 Glycine max
Glyma.07G048900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4146669-4156668 Glycine max
Glyma.07G048900 10.0kb downstream 10.0kb downstream 13966 true Chr07: 4156669-4170634 Glycine max
Glyma.07G048900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4160635-4170634 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031356 5273 Angiosperm View MSA
122296446 5265 Fabidae View MSA
124035649 5270 Rosid View MSA
123750385 5271 Pentapetalae View MSA
122795177 5272 Eudicot View MSA
123429068 5275 Viridiplantae View MSA
121350689 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 82.9113 0.0 338.18 High  
cufflinks 9.16103 0.0 35.4569    
cufflinks 8.99438 0.0 29.5246    
cufflinks 5.15643 0.0 19.7747   Low
cufflinks 21.2868 0.0 72.7877 High  
cufflinks 315.191 0.0 2042.07 High High
cufflinks 10.7502 0.0 34.4788    
cufflinks 12.189 0.0 38.1    
cufflinks 47.1309 0.0 170.255 High  
cufflinks 1.161       Low
cufflinks 4.109        
cufflinks 2.793        
cufflinks 12.111     High High
cufflinks 1.232       Low
cufflinks 2.613        
cufflinks 1.472        
cufflinks 11.119     High High
cufflinks 5.38        
cufflinks 2.321        
cufflinks 1.357       Low
cufflinks 4.359        
cufflinks 1.36       Low
cufflinks 3.821        
cufflinks 14.253     High High
cufflinks 1.65        
cufflinks 9.836     High High

0 Strain