Gene : Glyma.07G049200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11562:SF31 - RE54080P Genomic Order:  492
Name:  ? Glyma.07G049200 Secondary Identifier:  ? PAC:30493757
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G049200 0.5kb upstream 0.5kb upstream 5385 true Chr07: 4187619-4193003 Glycine max
Glyma.07G049200 0.5kb upstream 0.5kb upstream 500 false Chr07: 4192504-4193003 Glycine max
Glyma.07G049200 0.5kb downstream 0.5kb downstream 5385 true Chr07: 4187119-4192503 Glycine max
Glyma.07G049200 0.5kb downstream 0.5kb downstream 500 false Chr07: 4187119-4187618 Glycine max
Glyma.07G049200 1.0kb upstream 1.0kb upstream 5885 true Chr07: 4187619-4193503 Glycine max
Glyma.07G049200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4192504-4193503 Glycine max
Glyma.07G049200 1.0kb downstream 1.0kb downstream 5885 true Chr07: 4186619-4192503 Glycine max
Glyma.07G049200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4186619-4187618 Glycine max
Glyma.07G049200 2.0kb upstream 2.0kb upstream 6885 true Chr07: 4187619-4194503 Glycine max
Glyma.07G049200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4192504-4194503 Glycine max
Glyma.07G049200 2.0kb downstream 2.0kb downstream 6885 true Chr07: 4185619-4192503 Glycine max
Glyma.07G049200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4185619-4187618 Glycine max
Glyma.07G049200 5.0kb upstream 5.0kb upstream 9885 true Chr07: 4187619-4197503 Glycine max
Glyma.07G049200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4192504-4197503 Glycine max
Glyma.07G049200 5.0kb downstream 5.0kb downstream 9885 true Chr07: 4182619-4192503 Glycine max
Glyma.07G049200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4182619-4187618 Glycine max
Glyma.07G049200 10.0kb upstream 10.0kb upstream 14885 true Chr07: 4187619-4202503 Glycine max
Glyma.07G049200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4192504-4202503 Glycine max
Glyma.07G049200 10.0kb downstream 10.0kb downstream 14885 true Chr07: 4177619-4192503 Glycine max
Glyma.07G049200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4177619-4187618 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313245 5265 Fabidae View MSA
124072009 5270 Rosid View MSA
123747462 5271 Pentapetalae View MSA
122791570 5272 Eudicot View MSA
122042960 5273 Angiosperm View MSA
121349526 5274 Embryophyte View MSA
123427530 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.34868 0.0 35.0509   Low
cufflinks 13.3626 0.0 46.91    
cufflinks 14.4777 0.0 50.2362    
cufflinks 15.3149 0.0 53.8431    
cufflinks 8.7447 0.0 37.0371   Low
cufflinks 9.23579 0.0 38.435   Low
cufflinks 13.7283 0.0 49.2407    
cufflinks 16.9101 0.0 59.4307   High
cufflinks 12.5223 0.0 49.1197    
cufflinks 0.739        
cufflinks 0.343       Low
cufflinks 1.373       High
cufflinks 1.089        
cufflinks 0.779        
cufflinks 0.26       Low
cufflinks 0.931        
cufflinks 0.577        
cufflinks 1.192        
cufflinks 1.242        
cufflinks 1.026        
cufflinks 0.315       Low
cufflinks 1.16        
cufflinks 1.002        
cufflinks 0.436        
cufflinks 0.909        
cufflinks 0.273       Low

0 Strain