Gene : PhHAL.2G487500 P. hallii HAL v2.1
Defline:  (1 of 3) K00164 - 2-oxoglutarate dehydrogenase E1 component (OGDH, sucA) Genomic Order:  4270
Name:  ? PhHAL.2G487500 Secondary Identifier:  ? PAC:40410295
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-5084 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.2G487500 0.5kb upstream 0.5kb upstream 5433 true Chr02: 57823964-57829396 Panicum hallii HAL
PhHAL.2G487500 0.5kb upstream 0.5kb upstream 500 false Chr02: 57828897-57829396 Panicum hallii HAL
PhHAL.2G487500 0.5kb downstream 0.5kb downstream 5433 true Chr02: 57823464-57828896 Panicum hallii HAL
PhHAL.2G487500 0.5kb downstream 0.5kb downstream 500 false Chr02: 57823464-57823963 Panicum hallii HAL
PhHAL.2G487500 1.0kb upstream 1.0kb upstream 5933 true Chr02: 57823964-57829896 Panicum hallii HAL
PhHAL.2G487500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 57828897-57829896 Panicum hallii HAL
PhHAL.2G487500 1.0kb downstream 1.0kb downstream 5933 true Chr02: 57822964-57828896 Panicum hallii HAL
PhHAL.2G487500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 57822964-57823963 Panicum hallii HAL
PhHAL.2G487500 2.0kb upstream 2.0kb upstream 6933 true Chr02: 57823964-57830896 Panicum hallii HAL
PhHAL.2G487500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 57828897-57830896 Panicum hallii HAL
PhHAL.2G487500 2.0kb downstream 2.0kb downstream 6933 true Chr02: 57821964-57828896 Panicum hallii HAL
PhHAL.2G487500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 57821964-57823963 Panicum hallii HAL
PhHAL.2G487500 5.0kb upstream 5.0kb upstream 9933 true Chr02: 57823964-57833896 Panicum hallii HAL
PhHAL.2G487500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 57828897-57833896 Panicum hallii HAL
PhHAL.2G487500 5.0kb downstream 5.0kb downstream 9933 true Chr02: 57818964-57828896 Panicum hallii HAL
PhHAL.2G487500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 57818964-57823963 Panicum hallii HAL
PhHAL.2G487500 10.0kb upstream 10.0kb upstream 14933 true Chr02: 57823964-57838896 Panicum hallii HAL
PhHAL.2G487500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 57828897-57838896 Panicum hallii HAL
PhHAL.2G487500 10.0kb downstream 10.0kb downstream 14933 true Chr02: 57813964-57828896 Panicum hallii HAL
PhHAL.2G487500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 57813964-57823963 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190935 5267 Panicoideae View MSA
124575001 5269 Grass View MSA
122044869 5273 Angiosperm View MSA
121344749 5274 Embryophyte View MSA
123424102 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier