Gene : Glyma.07G053400 G. max Wm82.a2.v1
Defline:  (1 of 18) KOG3399 - Predicted Yippee-type zinc-binding protein Genomic Order:  534
Name:  ? Glyma.07G053400 Secondary Identifier:  ? PAC:30492547
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G053400 0.5kb upstream 0.5kb upstream 3159 true Chr07: 4677098-4680256 Glycine max
Glyma.07G053400 0.5kb upstream 0.5kb upstream 500 false Chr07: 4679757-4680256 Glycine max
Glyma.07G053400 0.5kb downstream 0.5kb downstream 3159 true Chr07: 4676598-4679756 Glycine max
Glyma.07G053400 0.5kb downstream 0.5kb downstream 500 false Chr07: 4676598-4677097 Glycine max
Glyma.07G053400 1.0kb upstream 1.0kb upstream 3659 true Chr07: 4677098-4680756 Glycine max
Glyma.07G053400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4679757-4680756 Glycine max
Glyma.07G053400 1.0kb downstream 1.0kb downstream 3659 true Chr07: 4676098-4679756 Glycine max
Glyma.07G053400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4676098-4677097 Glycine max
Glyma.07G053400 2.0kb upstream 2.0kb upstream 4659 true Chr07: 4677098-4681756 Glycine max
Glyma.07G053400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4679757-4681756 Glycine max
Glyma.07G053400 2.0kb downstream 2.0kb downstream 4659 true Chr07: 4675098-4679756 Glycine max
Glyma.07G053400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4675098-4677097 Glycine max
Glyma.07G053400 5.0kb upstream 5.0kb upstream 7659 true Chr07: 4677098-4684756 Glycine max
Glyma.07G053400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4679757-4684756 Glycine max
Glyma.07G053400 5.0kb downstream 5.0kb downstream 7659 true Chr07: 4672098-4679756 Glycine max
Glyma.07G053400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4672098-4677097 Glycine max
Glyma.07G053400 10.0kb upstream 10.0kb upstream 12659 true Chr07: 4677098-4689756 Glycine max
Glyma.07G053400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4679757-4689756 Glycine max
Glyma.07G053400 10.0kb downstream 10.0kb downstream 12659 true Chr07: 4667098-4679756 Glycine max
Glyma.07G053400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4667098-4677097 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041337 5273 Angiosperm View MSA
122297430 5265 Fabidae View MSA
124072414 5270 Rosid View MSA
123752615 5271 Pentapetalae View MSA
122791285 5272 Eudicot View MSA
123428914 5275 Viridiplantae View MSA
121343957 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.900422 0.0 5.21862    
cufflinks 4.93326 0.0 26.8974    
cufflinks 68.1434 0.0 266.972 High High
cufflinks 0.892365 0.0 4.35398    
cufflinks 3.09339 0.0 17.748    
cufflinks 36.7905 0.0 123.106 High High
cufflinks 0.310453 0.0 2.00944   Low
cufflinks 2.36627 0.0 14.3868    
cufflinks 9.54772 0.0 40.2414    
cufflinks 0.2       Low
cufflinks 4.376       High
cufflinks 4.339       High
cufflinks 0.641        
cufflinks 0.459        
cufflinks 1.956        
cufflinks 0.273       Low
cufflinks 0.736        
cufflinks 0.496        
cufflinks 1.545        
cufflinks 0.397        
cufflinks 1.907        
cufflinks 0.368        
cufflinks 0.392        
cufflinks 3.252       High
cufflinks 0.359        
cufflinks 0.745        

0 Strain