Gene : Glyma.07G041400 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED Genomic Order:  414
Name:  ? Glyma.07G041400 Secondary Identifier:  ? PAC:30493045
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G041400 0.5kb upstream 0.5kb upstream 5560 true Chr07: 3455108-3460667 Glycine max
Glyma.07G041400 0.5kb upstream 0.5kb upstream 500 false Chr07: 3455108-3455607 Glycine max
Glyma.07G041400 0.5kb downstream 0.5kb downstream 5560 true Chr07: 3455608-3461167 Glycine max
Glyma.07G041400 0.5kb downstream 0.5kb downstream 500 false Chr07: 3460668-3461167 Glycine max
Glyma.07G041400 1.0kb upstream 1.0kb upstream 6060 true Chr07: 3454608-3460667 Glycine max
Glyma.07G041400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3454608-3455607 Glycine max
Glyma.07G041400 1.0kb downstream 1.0kb downstream 6060 true Chr07: 3455608-3461667 Glycine max
Glyma.07G041400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3460668-3461667 Glycine max
Glyma.07G041400 2.0kb upstream 2.0kb upstream 7060 true Chr07: 3453608-3460667 Glycine max
Glyma.07G041400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3453608-3455607 Glycine max
Glyma.07G041400 2.0kb downstream 2.0kb downstream 7060 true Chr07: 3455608-3462667 Glycine max
Glyma.07G041400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3460668-3462667 Glycine max
Glyma.07G041400 5.0kb upstream 5.0kb upstream 10060 true Chr07: 3450608-3460667 Glycine max
Glyma.07G041400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3450608-3455607 Glycine max
Glyma.07G041400 5.0kb downstream 5.0kb downstream 10060 true Chr07: 3455608-3465667 Glycine max
Glyma.07G041400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3460668-3465667 Glycine max
Glyma.07G041400 10.0kb upstream 10.0kb upstream 15060 true Chr07: 3445608-3460667 Glycine max
Glyma.07G041400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3445608-3455607 Glycine max
Glyma.07G041400 10.0kb downstream 10.0kb downstream 15060 true Chr07: 3455608-3470667 Glycine max
Glyma.07G041400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3460668-3470667 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315145 5265 Fabidae View MSA
124071926 5270 Rosid View MSA
123747835 5271 Pentapetalae View MSA
122797679 5272 Eudicot View MSA
122046349 5273 Angiosperm View MSA
121349662 5274 Embryophyte View MSA
123381390 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.3962 0.0 41.1324    
cufflinks 4.57293 0.0 13.4166    
cufflinks 47.9174 0.0 134.544 High High
cufflinks 9.7629 0.0 26.532    
cufflinks 5.45512 0.0 15.6245    
cufflinks 13.8048 0.0 36.9626    
cufflinks 5.11693 0.0 14.7699    
cufflinks 5.25207 0.0 15.0947    
cufflinks 3.70126 0.0 11.1617   Low
cufflinks 42.531     High High
cufflinks 8.604     High  
cufflinks 19.963     High  
cufflinks 4.191        
cufflinks 1.285       Low
cufflinks 5.869     High  
cufflinks 3.897        
cufflinks 103.445     High High
cufflinks 11.466     High  
cufflinks 9.036     High  
cufflinks 3.086        
cufflinks 8.278     High  
cufflinks 2.906        
cufflinks 30.22     High High
cufflinks 8.213     High  
cufflinks 2.858        
cufflinks 47.473     High High

0 Strain