Gene : Glyma.07G041500 G. max Wm82.a2.v1
Defline:  (1 of 28) KOG0148 - Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) Genomic Order:  415
Name:  ? Glyma.07G041500 Secondary Identifier:  ? PAC:30495050
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G041500 0.5kb upstream 0.5kb upstream 7109 true Chr07: 3468876-3475984 Glycine max
Glyma.07G041500 0.5kb upstream 0.5kb upstream 500 false Chr07: 3468876-3469375 Glycine max
Glyma.07G041500 0.5kb downstream 0.5kb downstream 7109 true Chr07: 3469376-3476484 Glycine max
Glyma.07G041500 0.5kb downstream 0.5kb downstream 500 false Chr07: 3475985-3476484 Glycine max
Glyma.07G041500 1.0kb upstream 1.0kb upstream 7609 true Chr07: 3468376-3475984 Glycine max
Glyma.07G041500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3468376-3469375 Glycine max
Glyma.07G041500 1.0kb downstream 1.0kb downstream 7609 true Chr07: 3469376-3476984 Glycine max
Glyma.07G041500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3475985-3476984 Glycine max
Glyma.07G041500 2.0kb upstream 2.0kb upstream 8609 true Chr07: 3467376-3475984 Glycine max
Glyma.07G041500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3467376-3469375 Glycine max
Glyma.07G041500 2.0kb downstream 2.0kb downstream 8609 true Chr07: 3469376-3477984 Glycine max
Glyma.07G041500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3475985-3477984 Glycine max
Glyma.07G041500 5.0kb upstream 5.0kb upstream 11609 true Chr07: 3464376-3475984 Glycine max
Glyma.07G041500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3464376-3469375 Glycine max
Glyma.07G041500 5.0kb downstream 5.0kb downstream 11609 true Chr07: 3469376-3480984 Glycine max
Glyma.07G041500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3475985-3480984 Glycine max
Glyma.07G041500 10.0kb upstream 10.0kb upstream 16609 true Chr07: 3459376-3475984 Glycine max
Glyma.07G041500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3459376-3469375 Glycine max
Glyma.07G041500 10.0kb downstream 10.0kb downstream 16609 true Chr07: 3469376-3485984 Glycine max
Glyma.07G041500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3475985-3485984 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305402 5265 Fabidae View MSA
124064143 5270 Rosid View MSA
123750884 5271 Pentapetalae View MSA
122797321 5272 Eudicot View MSA
122051122 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349008 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.5218 0.0 240.128 High  
cufflinks 105.611 0.0 356.463 High  
cufflinks 58.7791 0.0 210.701 High  
cufflinks 112.275 0.0 388.487 High  
cufflinks 87.0752 0.0 275.019 High  
cufflinks 51.4067 0.0 176.698 High Low
cufflinks 296.41 0.0 1230.8 High High
cufflinks 76.3009 0.0 229.603 High  
cufflinks 66.1029 0.0 242.532 High  
cufflinks 14.613     High  
cufflinks 10.366     High Low
cufflinks 16.702     High  
cufflinks 13.605     High  
cufflinks 17.578     High  
cufflinks 6.053     High Low
cufflinks 19.709     High  
cufflinks 12.978     High  
cufflinks 19.451     High  
cufflinks 22.784     High High
cufflinks 19.801     High  
cufflinks 10.592     High  
cufflinks 18.73     High  
cufflinks 21.491     High High
cufflinks 11.321     High  
cufflinks 19.15     High  
cufflinks 10.681     High  

0 Strain