Gene : Glyma.07G042500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR30540:SF7 - K+ POTASSIUM TRANSPORTER Genomic Order:  425
Name:  ? Glyma.07G042500 Secondary Identifier:  ? PAC:30492895
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G042500 0.5kb upstream 0.5kb upstream 5631 true Chr07: 3527701-3533331 Glycine max
Glyma.07G042500 0.5kb upstream 0.5kb upstream 500 false Chr07: 3532832-3533331 Glycine max
Glyma.07G042500 0.5kb downstream 0.5kb downstream 5631 true Chr07: 3527201-3532831 Glycine max
Glyma.07G042500 0.5kb downstream 0.5kb downstream 500 false Chr07: 3527201-3527700 Glycine max
Glyma.07G042500 1.0kb upstream 1.0kb upstream 6131 true Chr07: 3527701-3533831 Glycine max
Glyma.07G042500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3532832-3533831 Glycine max
Glyma.07G042500 1.0kb downstream 1.0kb downstream 6131 true Chr07: 3526701-3532831 Glycine max
Glyma.07G042500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3526701-3527700 Glycine max
Glyma.07G042500 2.0kb upstream 2.0kb upstream 7131 true Chr07: 3527701-3534831 Glycine max
Glyma.07G042500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3532832-3534831 Glycine max
Glyma.07G042500 2.0kb downstream 2.0kb downstream 7131 true Chr07: 3525701-3532831 Glycine max
Glyma.07G042500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3525701-3527700 Glycine max
Glyma.07G042500 5.0kb upstream 5.0kb upstream 10131 true Chr07: 3527701-3537831 Glycine max
Glyma.07G042500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3532832-3537831 Glycine max
Glyma.07G042500 5.0kb downstream 5.0kb downstream 10131 true Chr07: 3522701-3532831 Glycine max
Glyma.07G042500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3522701-3527700 Glycine max
Glyma.07G042500 10.0kb upstream 10.0kb upstream 15131 true Chr07: 3527701-3542831 Glycine max
Glyma.07G042500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3532832-3542831 Glycine max
Glyma.07G042500 10.0kb downstream 10.0kb downstream 15131 true Chr07: 3517701-3532831 Glycine max
Glyma.07G042500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3517701-3527700 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122238635 5265 Fabidae Singleton cluster - no MSA
124050982 5270 Rosid View MSA
123744165 5271 Pentapetalae View MSA
122788386 5272 Eudicot View MSA
122048447 5273 Angiosperm View MSA
123429147 5275 Viridiplantae View MSA
121351755 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.39957 0.0 1.45922    
cufflinks 0.939254 0.0 3.194    
cufflinks 2.85953 0.0 8.40833   High
cufflinks 0.0139119 0.0 0.0600706 Low Low
cufflinks 0.0746804 0.0 0.294248 Low  
cufflinks 0.361913 0.0 1.33091    
cufflinks 0.156936 0.0 0.599531 Low  
cufflinks 0.0956314 0.0 0.373298 Low  
cufflinks 0.077     Low  
cufflinks 0.025     Low  
cufflinks 0.717       High
cufflinks 0.019     Low  
cufflinks 0.002     Low Low
cufflinks 0.123        
cufflinks 0.049     Low  
cufflinks 0.041     Low  
cufflinks 0.21       High
cufflinks 0.275       High
cufflinks 0.007     Low Low
cufflinks 0.02     Low  
cufflinks 0.012     Low  
cufflinks 0.014     Low  
cufflinks 0.018     Low  
cufflinks 0.023     Low  
cufflinks 0.087        

0 Strain