Gene : Glyma.07G042800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31307:SF4 - 6B-INTERACTING PROTEIN 1-LIKE 1-RELATED Genomic Order:  428
Name:  ? Glyma.07G042800 Secondary Identifier:  ? PAC:30493963
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G042800 0.5kb upstream 0.5kb upstream 2651 true Chr07: 3561184-3563834 Glycine max
Glyma.07G042800 0.5kb upstream 0.5kb upstream 500 false Chr07: 3563335-3563834 Glycine max
Glyma.07G042800 0.5kb downstream 0.5kb downstream 2651 true Chr07: 3560684-3563334 Glycine max
Glyma.07G042800 0.5kb downstream 0.5kb downstream 500 false Chr07: 3560684-3561183 Glycine max
Glyma.07G042800 1.0kb upstream 1.0kb upstream 3151 true Chr07: 3561184-3564334 Glycine max
Glyma.07G042800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3563335-3564334 Glycine max
Glyma.07G042800 1.0kb downstream 1.0kb downstream 3151 true Chr07: 3560184-3563334 Glycine max
Glyma.07G042800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3560184-3561183 Glycine max
Glyma.07G042800 2.0kb upstream 2.0kb upstream 4151 true Chr07: 3561184-3565334 Glycine max
Glyma.07G042800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3563335-3565334 Glycine max
Glyma.07G042800 2.0kb downstream 2.0kb downstream 4151 true Chr07: 3559184-3563334 Glycine max
Glyma.07G042800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3559184-3561183 Glycine max
Glyma.07G042800 5.0kb upstream 5.0kb upstream 7151 true Chr07: 3561184-3568334 Glycine max
Glyma.07G042800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3563335-3568334 Glycine max
Glyma.07G042800 5.0kb downstream 5.0kb downstream 7151 true Chr07: 3556184-3563334 Glycine max
Glyma.07G042800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3556184-3561183 Glycine max
Glyma.07G042800 10.0kb upstream 10.0kb upstream 12151 true Chr07: 3561184-3573334 Glycine max
Glyma.07G042800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3563335-3573334 Glycine max
Glyma.07G042800 10.0kb downstream 10.0kb downstream 12151 true Chr07: 3551184-3563334 Glycine max
Glyma.07G042800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3551184-3561183 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304831 5265 Fabidae View MSA
124067837 5270 Rosid View MSA
123743560 5271 Pentapetalae View MSA
122785837 5272 Eudicot View MSA
122048204 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6366 0.0 28.4837    
cufflinks 10.935 0.0 29.3128    
cufflinks 10.0429 0.0 27.0529    
cufflinks 8.84928 0.0 23.9036    
cufflinks 8.33545 0.0 22.479    
cufflinks 4.87733 0.0 13.7602   Low
cufflinks 20.4536 0.0 54.993   High
cufflinks 7.06279 0.0 19.369    
cufflinks 6.94928 0.0 19.0294    
cufflinks 4.867       Low
cufflinks 13.345     High  
cufflinks 7.435     High  
cufflinks 2.759       Low
cufflinks 2.686       Low
cufflinks 21.203     High High
cufflinks 15.665     High  
cufflinks 6.918     High  
cufflinks 8.652     High  
cufflinks 9.259     High  
cufflinks 15.911     High  
cufflinks 13.275     High  
cufflinks 14.209     High  
cufflinks 8.567     High  
cufflinks 11.22     High  
cufflinks 14.834     High  
cufflinks 7.436     High  

0 Strain