Gene : PhHAL.3G042000 P. hallii HAL v2.1
Defline:  (1 of 3) KOG0978//KOG4593 - E3 ubiquitin ligase involved in syntaxin degradation // Mitotic checkpoint protein MAD1 Genomic Order:  408
Name:  ? PhHAL.3G042000 Secondary Identifier:  ? PAC:40406740
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.3G042000 0.5kb upstream 0.5kb upstream 7466 true Chr03: 2533629-2541094 Panicum hallii HAL
PhHAL.3G042000 0.5kb upstream 0.5kb upstream 500 false Chr03: 2540595-2541094 Panicum hallii HAL
PhHAL.3G042000 0.5kb downstream 0.5kb downstream 7466 true Chr03: 2533129-2540594 Panicum hallii HAL
PhHAL.3G042000 0.5kb downstream 0.5kb downstream 500 false Chr03: 2533129-2533628 Panicum hallii HAL
PhHAL.3G042000 1.0kb upstream 1.0kb upstream 7966 true Chr03: 2533629-2541594 Panicum hallii HAL
PhHAL.3G042000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2540595-2541594 Panicum hallii HAL
PhHAL.3G042000 1.0kb downstream 1.0kb downstream 7966 true Chr03: 2532629-2540594 Panicum hallii HAL
PhHAL.3G042000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2532629-2533628 Panicum hallii HAL
PhHAL.3G042000 2.0kb upstream 2.0kb upstream 8966 true Chr03: 2533629-2542594 Panicum hallii HAL
PhHAL.3G042000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2540595-2542594 Panicum hallii HAL
PhHAL.3G042000 2.0kb downstream 2.0kb downstream 8966 true Chr03: 2531629-2540594 Panicum hallii HAL
PhHAL.3G042000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2531629-2533628 Panicum hallii HAL
PhHAL.3G042000 5.0kb upstream 5.0kb upstream 11966 true Chr03: 2533629-2545594 Panicum hallii HAL
PhHAL.3G042000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2540595-2545594 Panicum hallii HAL
PhHAL.3G042000 5.0kb downstream 5.0kb downstream 11966 true Chr03: 2528629-2540594 Panicum hallii HAL
PhHAL.3G042000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2528629-2533628 Panicum hallii HAL
PhHAL.3G042000 10.0kb upstream 10.0kb upstream 16966 true Chr03: 2533629-2550594 Panicum hallii HAL
PhHAL.3G042000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2540595-2550594 Panicum hallii HAL
PhHAL.3G042000 10.0kb downstream 10.0kb downstream 16966 true Chr03: 2523629-2540594 Panicum hallii HAL
PhHAL.3G042000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2523629-2533628 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185145 5267 Panicoideae View MSA
124568295 5269 Grass View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier