Gene : Glyma.07G043200 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG2435 - Uncharacterized conserved protein Genomic Order:  432
Name:  ? Glyma.07G043200 Secondary Identifier:  ? PAC:30494798
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G043200 0.5kb upstream 0.5kb upstream 3654 true Chr07: 3588796-3592449 Glycine max
Glyma.07G043200 0.5kb upstream 0.5kb upstream 500 false Chr07: 3591950-3592449 Glycine max
Glyma.07G043200 0.5kb downstream 0.5kb downstream 3654 true Chr07: 3588296-3591949 Glycine max
Glyma.07G043200 0.5kb downstream 0.5kb downstream 500 false Chr07: 3588296-3588795 Glycine max
Glyma.07G043200 1.0kb upstream 1.0kb upstream 4154 true Chr07: 3588796-3592949 Glycine max
Glyma.07G043200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3591950-3592949 Glycine max
Glyma.07G043200 1.0kb downstream 1.0kb downstream 4154 true Chr07: 3587796-3591949 Glycine max
Glyma.07G043200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3587796-3588795 Glycine max
Glyma.07G043200 2.0kb upstream 2.0kb upstream 5154 true Chr07: 3588796-3593949 Glycine max
Glyma.07G043200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3591950-3593949 Glycine max
Glyma.07G043200 2.0kb downstream 2.0kb downstream 5154 true Chr07: 3586796-3591949 Glycine max
Glyma.07G043200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3586796-3588795 Glycine max
Glyma.07G043200 5.0kb upstream 5.0kb upstream 8154 true Chr07: 3588796-3596949 Glycine max
Glyma.07G043200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3591950-3596949 Glycine max
Glyma.07G043200 5.0kb downstream 5.0kb downstream 8154 true Chr07: 3583796-3591949 Glycine max
Glyma.07G043200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3583796-3588795 Glycine max
Glyma.07G043200 10.0kb upstream 10.0kb upstream 13154 true Chr07: 3588796-3601949 Glycine max
Glyma.07G043200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3591950-3601949 Glycine max
Glyma.07G043200 10.0kb downstream 10.0kb downstream 13154 true Chr07: 3578796-3591949 Glycine max
Glyma.07G043200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3578796-3588795 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305861 5265 Fabidae View MSA
124068389 5270 Rosid View MSA
123739238 5271 Pentapetalae View MSA
122786163 5272 Eudicot View MSA
122042406 5273 Angiosperm View MSA
121347727 5274 Embryophyte View MSA
123425105 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.45004 0.0 19.4258    
cufflinks 8.05916 0.0 23.5259    
cufflinks 3.07783 0.0 10.198   Low
cufflinks 7.09653 0.0 21.0459    
cufflinks 11.0361 0.0 31.1087    
cufflinks 8.35248 0.0 24.2666    
cufflinks 13.1179 0.0 36.3958   High
cufflinks 6.76323 0.0 20.1959    
cufflinks 10.3169 0.0 29.2409    
cufflinks 2.399        
cufflinks 1.553       Low
cufflinks 1.821        
cufflinks 4.609       High
cufflinks 6.573       High
cufflinks 3.819        
cufflinks 3.075        
cufflinks 1.499       Low
cufflinks 2.958        
cufflinks 2.885        
cufflinks 3.261        
cufflinks 2.284        
cufflinks 2.925        
cufflinks 1.996        
cufflinks 1.406       Low
cufflinks 3.044        
cufflinks 1.919        

0 Strain