Gene : Glyma.07G043900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11200:SF122 - PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED Genomic Order:  439
Name:  ? Glyma.07G043900 Secondary Identifier:  ? PAC:30491744
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G043900 0.5kb upstream 0.5kb upstream 11416 true Chr07: 3629824-3641239 Glycine max
Glyma.07G043900 0.5kb upstream 0.5kb upstream 500 false Chr07: 3640740-3641239 Glycine max
Glyma.07G043900 0.5kb downstream 0.5kb downstream 11416 true Chr07: 3629324-3640739 Glycine max
Glyma.07G043900 0.5kb downstream 0.5kb downstream 500 false Chr07: 3629324-3629823 Glycine max
Glyma.07G043900 1.0kb upstream 1.0kb upstream 11916 true Chr07: 3629824-3641739 Glycine max
Glyma.07G043900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3640740-3641739 Glycine max
Glyma.07G043900 1.0kb downstream 1.0kb downstream 11916 true Chr07: 3628824-3640739 Glycine max
Glyma.07G043900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3628824-3629823 Glycine max
Glyma.07G043900 2.0kb upstream 2.0kb upstream 12916 true Chr07: 3629824-3642739 Glycine max
Glyma.07G043900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3640740-3642739 Glycine max
Glyma.07G043900 2.0kb downstream 2.0kb downstream 12916 true Chr07: 3627824-3640739 Glycine max
Glyma.07G043900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3627824-3629823 Glycine max
Glyma.07G043900 5.0kb upstream 5.0kb upstream 15916 true Chr07: 3629824-3645739 Glycine max
Glyma.07G043900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3640740-3645739 Glycine max
Glyma.07G043900 5.0kb downstream 5.0kb downstream 15916 true Chr07: 3624824-3640739 Glycine max
Glyma.07G043900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3624824-3629823 Glycine max
Glyma.07G043900 10.0kb upstream 10.0kb upstream 20916 true Chr07: 3629824-3650739 Glycine max
Glyma.07G043900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3640740-3650739 Glycine max
Glyma.07G043900 10.0kb downstream 10.0kb downstream 20916 true Chr07: 3619824-3640739 Glycine max
Glyma.07G043900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3619824-3629823 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041370 5273 Angiosperm View MSA
122316085 5265 Fabidae View MSA
124064619 5270 Rosid View MSA
123750284 5271 Pentapetalae View MSA
122786503 5272 Eudicot View MSA
121350498 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.4181 0.0 59.0068    
cufflinks 5.09696 0.0 25.3813   Low
cufflinks 19.2594 0.0 94.7962   High
cufflinks 8.36862 0.0 41.1509    
cufflinks 5.15079 0.0 23.7934   Low
cufflinks 11.1754 0.0 52.038    
cufflinks 5.53294 0.0 26.6799    
cufflinks 7.68388 0.0 30.8252    
cufflinks 6.74288 0.0 30.2247    
cufflinks 1.048        
cufflinks 1.002        
cufflinks 0.973        
cufflinks 0.485        
cufflinks 0.415       Low
cufflinks 0.673        
cufflinks 0.454        
cufflinks 1.668       High
cufflinks 0.759        
cufflinks 0.43        
cufflinks 0.393       Low
cufflinks 1.11        
cufflinks 0.396       Low
cufflinks 0.676        
cufflinks 1.109        
cufflinks 0.386       Low
cufflinks 1.689       High

0 Strain